Non-Coding RNA Search

rtes04_k17.y1

Sequence:


               
               ATTTCCTTCGGTGACGTTTAATTCCCTCTCGGCCCAAGTGTTGTATGCTTATCTTCTTTA
AATTTCAGCTCCCAAATACTTTACAGCTCCTTTAAAAAATTTCCCTTGCTGCCTTTTGAT
CTTAATGGATTAAAACACAACTATTTAGTTTAGCTTAAATCAAACTTGTGGAAACTTCCT
TATCAATAAAGTGATAGATGTATTAATAAAATTGAGTGTATCAAAATTATTCAGGAACTT
TGAAGGATTTCGTCTGCAAGTGGAAAACAGCAGGAATCTTGAGCGCTGAAAGTCCTGAAG
GAGTTGTTATTTCTGGCCCTTTGATAGAAATAAAGGGAGACTCATGGCTAAAGAACATCA
AAGTGTCAAAATCAACTTCGCTTGTAGTTTACTCGTCTGATGAGACATCATGTGAAGAGT
TGGAGCTGGTCGTGATTCAGTGGAGCTTGACAAAGTGTCTCTGTGTCCCACTAGCTAACA
GGCTGCTTTCTCTGTGTCTCAGGGGCTGGGGTGTCTGTGTAGTGAGGTCTGAGGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTCCTTCGGTGACGTTTAATTCCCTCTCGGCCCAAGTGTTGTATGCTTATCTTCTTTA
AATTTCAGCTCCCAAATACTTTACAGCTCCTTTAAAAAATTTCCCTTGCTGCCTTTTGAT
CTTAATGGATTAAAACACAACTATTTAGTTTAGCTTAAATCAAACTTGTGGAAACTTCCT
TATCAATAAAGTGATAGATGTATTAATAAAATTGAGTGTATCAAAATTATTCAGGAACTT
TGAAGGATTTCGTCTGCAAGTGGAAAACAGCAGGAATCTTGAGCGCTGAAAGTCCTGAAG
GAGTTGTTATTTCTGGCCCTTTGATAGAAATAAAGGGAGACTCATGGCTAAAGAACATCA
AAGTGTCAAAATCAACTTCGCTTGTAGTTTACTCGTCTGATGAGACATCATGTGAAGAGT
TGGAGCTGGTCGTGATTCAGTGGAGCTTGACAAAGTGTCTCTGTGTCCCACTAGCTAACA
GGCTGCTTTCTCTGTGTCTCAGGGGCTGGGGTGTCTGTGTAGTGAGGTCTGAGGTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               262-536, gnl|bosTau2|chr27 (2311474-2311748)
               

               
               262-536, gnl|Hg17|chr4 (177746639-177746913)
               

               
               262-536, gnl|Mm7|chr8 (53206046-53205817)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               262-536, gnl|bosTau2|chr27 (2311474-2311748)
               

               
               262-536, gnl|Hg17|chr4 (177746639-177746913)
               

               
               262-536, gnl|Mm7|chr8 (53206046-53205817)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	262-536, gnl\|bosTau2\|chr27 (2311474-2311748)
	262-536, gnl\|Hg17\|chr4 (177746639-177746913)
	262-536, gnl\|Mm7\|chr8 (53206046-53205817)