rtes06_o13.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTGCAGGATGTCAGGAAATTAAGAAGGATCAGAAGAAATGGAGTTTATACAATGTCTG TGACCAGGCACTGGAAAAGATGCTTCTTGCTTGAATGTGGCCCCTTGAGTTACTCACTTG GTAGCAAGTGAGTCTCCCAGCAAGGACCTGCTACTTTCAGAGTCAGAAGAACTGCAGATT ACCAACCCTGGAAATTAATGTGGAATTGCCTGCCCAATTCAGGCAGAGAATCTCACAGAC AGATCAGGATGAACTCCAGACTTCCTTGGTATCCCTCCTTTTAAGATTCAAATTCCTAAG AGAACAAATCTTGTTGTTCTTATTGAGATCCAATCATTGGTTGCCAGTAAGACGACAGGC CAGTCAAAACTGCAAGCAATTCTGGAGGAGTGGTTGCCCAGAGGAAATTCACCATGCTGT TATAAGAAGGGAGGATTCATGCTGGAGACAATGCATGGCTACCATGTATGGTATCTAATT GGATCTTTCTGTCCCTCACCCATCTTATCAGGTATACAGATTAGCACTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTGCAGGATGTCAGGAAATTAAGAAGGATCAGAAGAAATGGAGTTTATACAATGTCTG TGACCAGGCACTGGAAAAGATGCTTCTTGCTTGAATGTGGCCCCTTGAGTTACTCACTTG GTAGCAAGTGAGTCTCCCAGCAAGGACCTGCTACTTTCAGAGTCAGAAGAACTGCAGATT ACCAACCCTGGAAATTAATGTGGAATTGCCTGCCCAATTCAGGCAGAGAATCTCACAGAC AGATCAGGATGAACTCCAGACTTCCTTGGTATCCCTCCTTTTAAGATTCAAATTCCTAAG AGAACAAATCTTGTTGTTCTTATTGAGATCCAATCATTGGTTGCCAGTAAGACGACAGGC CAGTCAAAACTGCAAGCAATTCTGGAGGAGTGGTTGCCCAGAGGAAATTCACCATGCTGT TATAAGAAGGGAGGATTCATGCTGGAGACAATGCATGGCTACCATGTATGGTATCTAATT GGATCTTTCTGTCCCTCACCCATCTTATCAGGTATACAGATTAGCACTT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 50-157, - strand, RNAz p=0.928873 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 50-157, - strand, RNAz p=0.928873 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 12-242, gnl|bosTau2|chr2 (62834510-62834273) | |
| 12-242, gnl|canFam2|chr37 (27319278-27319607) | |
| 12-242, gnl|dasNov1|scaffold_116969 (214-553) | |
| 12-242, gnl|echTel1|scaffold_323394 (34908-34584) | |
| 12-242, gnl|hg17|chr2 (218170224-218170558) | |
| 12-242, gnl|Hg17|chr2 (218170286-218170526) | |
| 12-242, gnl|loxAfr1|scaffold_289 (94313-93983) | |
| 12-242, gnl|mm7|chr1 (73834309-73834639) | |
| 12-242, gnl|Mm7|chr1 (73834375-73834609) | |
| 12-242, gnl|oryCun1|scaffold_213775 (50038-49705) | |
| 12-242, gnl|panTro1|chr13 (108327026-108327360) | |
| 12-242, gnl|rheMac2|chr12 (81285296-81285624) | |
| 12-242, gnl|rn3|chr9 (73052476-73052804) | |
| 243-529, gnl|bosTau2|chr2 (62832834-62832542) | |
| 243-529, gnl|canFam2|chr37 (27320518-27320832) | |
| 243-529, gnl|dasNov1|scaffold_116969 (1386-1737) | |
| 243-529, gnl|echTel1|scaffold_323394 (33610-33248) | |
| 243-529, gnl|hg17|chr2 (218171473-218171802) | |
| 243-529, gnl|Hg17|chr2 (218171501-218171793) | |
| 243-529, gnl|loxAfr1|scaffold_289 (93158-92803) | |
| 243-529, gnl|mm7|chr1 (73835492-73835815) | |
| 243-529, gnl|Mm7|chr1 (73835518-73835805) | |
| 243-529, gnl|oryCun1|scaffold_213775 (48994-48652) | |
| 243-529, gnl|panTro1|chr13 (108328274-108328605) | |
| 243-529, gnl|rheMac2|chr12 (81286539-81286868) | |
| 243-529, gnl|rn3|chr9 (73053588-73053924) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-242, gnl|bosTau2|chr2 (62834510-62834273) | |
| 12-242, gnl|canFam2|chr37 (27319278-27319607) | |
| 12-242, gnl|dasNov1|scaffold_116969 (214-553) | |
| 12-242, gnl|echTel1|scaffold_323394 (34908-34584) | |
| 12-242, gnl|hg17|chr2 (218170224-218170558) | |
| 12-242, gnl|Hg17|chr2 (218170286-218170526) | |
| 12-242, gnl|loxAfr1|scaffold_289 (94313-93983) | |
| 12-242, gnl|mm7|chr1 (73834309-73834639) | |
| 12-242, gnl|Mm7|chr1 (73834375-73834609) | |
| 12-242, gnl|oryCun1|scaffold_213775 (50038-49705) | |
| 12-242, gnl|panTro1|chr13 (108327026-108327360) | |
| 12-242, gnl|rheMac2|chr12 (81285296-81285624) | |
| 12-242, gnl|rn3|chr9 (73052476-73052804) | |
| 243-529, gnl|bosTau2|chr2 (62832834-62832542) | |
| 243-529, gnl|canFam2|chr37 (27320518-27320832) | |
| 243-529, gnl|dasNov1|scaffold_116969 (1386-1737) | |
| 243-529, gnl|echTel1|scaffold_323394 (33610-33248) | |
| 243-529, gnl|hg17|chr2 (218171473-218171802) | |
| 243-529, gnl|Hg17|chr2 (218171501-218171793) | |
| 243-529, gnl|loxAfr1|scaffold_289 (93158-92803) | |
| 243-529, gnl|mm7|chr1 (73835492-73835815) | |
| 243-529, gnl|Mm7|chr1 (73835518-73835805) | |
| 243-529, gnl|oryCun1|scaffold_213775 (48994-48652) | |
| 243-529, gnl|panTro1|chr13 (108328274-108328605) | |
| 243-529, gnl|rheMac2|chr12 (81286539-81286868) | |
| 243-529, gnl|rn3|chr9 (73053588-73053924) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |