Non-Coding RNA Search

rtes07_n9.y1

Sequence:


               
               CCGGGACGCGTCTGGGAGGAGCCGCCCCGCCACGGCCGCGATGGGCTCCGCACTTAGGCA
GCTGCACACAAAGAACTTTTTCTGCATCACCCAGTGGCGCCAGGATCCCTTCCCTGTGGA
CAGCTTGTGTGCACGTCGCAGACTTTGGAGCCAGCCACTCCGTTTGAAAATTCTCAAGTA
GAAAGAGGAAAACTAGCTGAAGTGAGATTTCTCCTCCCGTAAGACAGACACGCTTTCTCT
TCCCTCCCGTTTTTTGCATTCGTCCTTAACTGGTTCCTAGACATTCACAGCCACCCGGCT
ATTTCGGCTATTTCGTTTCTGGTCTTACAGATGAAAACCAAAGTCAACTGTTTCAGTCTC
GTCCTGACTCTGGGTCTTTACGTCCTTGATTAACCATCAACGTTCCCTCTTGTGCCGCTT
CAGGAACCTGCTGGTGAAACGTCTTTTTGAAAAAGTTGCATTTGAAGGTCTGCCACTTAC
ATGTTTCTTTCAAATCTGAAATTTTTCTCCACTAAAATTATATTTCAATAAAGCAGGTTT
TTAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGGACGCGTCTGGGAGGAGCCGCCCCGCCACGGCCGCGATGGGCTCCGCACTTAGGCA
GCTGCACACAAAGAACTTTTTCTGCATCACCCAGTGGCGCCAGGATCCCTTCCCTGTGGA
CAGCTTGTGTGCACGTCGCAGACTTTGGAGCCAGCCACTCCGTTTGAAAATTCTCAAGTA
GAAAGAGGAAAACTAGCTGAAGTGAGATTTCTCCTCCCGTAAGACAGACACGCTTTCTCT
TCCCTCCCGTTTTTTGCATTCGTCCTTAACTGGTTCCTAGACATTCACAGCCACCCGGCT
ATTTCGGCTATTTCGTTTCTGGTCTTACAGATGAAAACCAAAGTCAACTGTTTCAGTCTC
GTCCTGACTCTGGGTCTTTACGTCCTTGATTAACCATCAACGTTCCCTCTTGTGCCGCTT
CAGGAACCTGCTGGTGAAACGTCTTTTTGAAAAAGTTGCATTTGAAGGTCTGCCACTTAC
ATGTTTCTTTCAAATCTGAAATTTTTCTCCACTAAAATTATATTTCAATAAAGCAGGTTT
TTAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-547, gnl|bosTau2|chr5 (15382113-15382658)
               

               
               1-547, gnl|Hg17|chr12 (92487924-92487306)
               

               
               1-547, gnl|Mm7|chr10 (94959697-94960258)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-547, gnl|bosTau2|chr5 (15382113-15382658)
               

               
               1-547, gnl|Hg17|chr12 (92487924-92487306)
               

               
               1-547, gnl|Mm7|chr10 (94959697-94960258)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-547, gnl\|bosTau2\|chr5 (15382113-15382658)
	1-547, gnl\|Hg17\|chr12 (92487924-92487306)
	1-547, gnl\|Mm7\|chr10 (94959697-94960258)