Non-Coding RNA Search

rtes08_i5.y1

Sequence:


               
               TTATTTTGAATTTGACACTGTTTGAACTTTATTATGAGCTTTATATAAGCCCAGAAGGAA
AGAAAAGCTAATAGAAAGTAAAAGCAAGCCAAATGTCAAAAAATTTAGATTAGCTTTAAA
TATTGCCCCAAAAATGCTTTTCAAACAATTTATATACAATTAAAACTCCTTCCCAACTTG
TTTTCAATTTACTTTCCCAAATTAATCTCCTTTTATTTTCATTACAAACTCTATGTATAT
GTCACGATTAGCCAGTCTTTAAATGTATCTTATATTTTCATTCTTCCATGTTTTGGTATA
TTACTCCCTCTGTTTGGATTGTCCTTTTCTTATTTTTCCAAAAGACAAAATTCTATTTAC
TCTTCAAAGCCCAACTCAAATGTCAACTCCTCCGTGAGATACTGCCCTGATATTTCCAGG
CAAGAGTAATAATTTCTGTCCCTGTGTCTCCTAGAATCTGCTCATTCAACTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATTTTGAATTTGACACTGTTTGAACTTTATTATGAGCTTTATATAAGCCCAGAAGGAA
AGAAAAGCTAATAGAAAGTAAAAGCAAGCCAAATGTCAAAAAATTTAGATTAGCTTTAAA
TATTGCCCCAAAAATGCTTTTCAAACAATTTATATACAATTAAAACTCCTTCCCAACTTG
TTTTCAATTTACTTTCCCAAATTAATCTCCTTTTATTTTCATTACAAACTCTATGTATAT
GTCACGATTAGCCAGTCTTTAAATGTATCTTATATTTTCATTCTTCCATGTTTTGGTATA
TTACTCCCTCTGTTTGGATTGTCCTTTTCTTATTTTTCCAAAAGACAAAATTCTATTTAC
TCTTCAAAGCCCAACTCAAATGTCAACTCCTCCGTGAGATACTGCCCTGATATTTCCAGG
CAAGAGTAATAATTTCTGTCCCTGTGTCTCCTAGAATCTGCTCATTCAACTATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               189-474, gnl|bosTau2|chr3 (66653710-66653427)
               

               
               189-474, gnl|Hg17|chr1 (49717873-49718107)
               

               
               189-474, gnl|Mm7|chr4 (110055233-110054955)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               189-474, gnl|bosTau2|chr3 (66653710-66653427)
               

               
               189-474, gnl|Hg17|chr1 (49717873-49718107)
               

               
               189-474, gnl|Mm7|chr4 (110055233-110054955)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	189-474, gnl\|bosTau2\|chr3 (66653710-66653427)
	189-474, gnl\|Hg17\|chr1 (49717873-49718107)
	189-474, gnl\|Mm7\|chr4 (110055233-110054955)