Non-Coding RNA Search

rtes09_h12.y1

Sequence:


               
               GTCTCAGCAAGTCCGAGCAAGAGCCTTTGAGGCGTGAGAATCCGGAACTGGTAACGCGCT
TTCTCCGATTGGCCAACCCAAAGGTTCCTATTTGTATATGCAAAGATGAGGCGGAGCTAG
CCAGTGAGGTCACGTGGTCAAGAACGACTGAAGGACCCCGGGACGCGAGGGTGCGGCCGA
Agctccagtggcgcaatcggttagcgcgcggtacttatatagcagtgcaagcggagcaat
gccgaggttgtgagttcgatcctcacctggagcaACTTTTCTTCATATCAGTATTTTAGA
GATTTATATGTCTTATTGATCGAGCCGAACACCTACATCACTTAGAGGAATGAACGTTTC
GATCTTTGCAATTTTCAAGCTGGAAAGACTCCTGGGACTCTGACGATGGTCGCTAAGGGA
GTGTTTTGTATTGTGGGAGGTGCCGTTCTCTTCATCGTCACCAGGGGGTGGCATCGCCTC
TTAGATGCCTGGGTCTGCAAATCTCAGTTCAAGACTTCTGCACATGCCAGACTTTTGTGT
CCTCTGCAAACTCTGTATGTGACACTCTCTCCTCCATCTGTCTCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTCAGCAAGTCCGAGCAAGAGCCTTTGAGGCGTGAGAATCCGGAACTGGTAACGCGCT
TTCTCCGATTGGCCAACCCAAAGGTTCCTATTTGTATATGCAAAGATGAGGCGGAGCTAG
CCAGTGAGGTCACGTGGTCAAGAACGACTGAAGGACCCCGGGACGCGAGGGTGCGGCCGA
Agctccagtggcgcaatcggttagcgcgcggtacttatatagcagtgcaagcggagcaat
gccgaggttgtgagttcgatcctcacctggagcaACTTTTCTTCATATCAGTATTTTAGA
GATTTATATGTCTTATTGATCGAGCCGAACACCTACATCACTTAGAGGAATGAACGTTTC
GATCTTTGCAATTTTCAAGCTGGAAAGACTCCTGGGACTCTGACGATGGTCGCTAAGGGA
GTGTTTTGTATTGTGGGAGGTGCCGTTCTCTTCATCGTCACCAGGGGGTGGCATCGCCTC
TTAGATGCCTGGGTCTGCAAATCTCAGTTCAAGACTTCTGCACATGCCAGACTTTTGTGT
CCTCTGCAAACTCTGTATGTGACACTCTCTCCTCCATCTGTCTCTGT

ncRNA annotation: 1 entry(ies)

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               182-274, tRNA Ile : RF00005;tRNA; (AC098824.3/118179-118271), RaveNnA Score=45.9

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               182-274, tRNA Ile : RF00005;tRNA; (AC098824.3/118179-118271), RaveNnA Score=45.9

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)