Non-Coding RNA Search

rtes09_h14.y1

Sequence:


               
               ACAACTGCGGGTTTCAGCCGTGACGAACTGATCTGATCTCAGTTCATTTGACTCGGCTGT
GCCCATAGGACTCTGAGACATTGGAGTACTTTGTCTGCATTATTTTTTAACATCAGTAGA
TATTTGTGGATGTGTGAATAATGCCTGAACGTCTCATCTTTTTGCTAGTTTATGTTTATC
ACCACACACAGCCTATTAGTAAGACCAGCTTTAGCAGCAGCATGAAGTAGAGATCAAAGG
TCTGACGATTCAGGGAGGCCAGTGTAAAGCAAAATCTCCCAAAATATGGGGTAGTCCTAC
CCATCTCATTCCTTTCTAGATCATAAAATCCATCAGAAAGCGCTGCAACTGCCTTGTGGA
CTGAAGTGTCCCTGGCAACTGGGATAATACCAGCACGATGGAAGCACTCAGTCAGTATTT
GTTGAATGAATGAACAATTGAATAGGTGGATAGACAGATAACTGAATTCTGCCTTTTGAT
AACTGGAAAAAAATCAGGAATTGATGTTATACTAATTGGCACTACAGTTTCTACACAGAA
CCAGAATTGACTCTTCATAAATATTTTTTAGAGAAGTGAATCAATGACTTTGAAGTCTTT
AAGGGTTTGGGAAAATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAACTGCGGGTTTCAGCCGTGACGAACTGATCTGATCTCAGTTCATTTGACTCGGCTGT
GCCCATAGGACTCTGAGACATTGGAGTACTTTGTCTGCATTATTTTTTAACATCAGTAGA
TATTTGTGGATGTGTGAATAATGCCTGAACGTCTCATCTTTTTGCTAGTTTATGTTTATC
ACCACACACAGCCTATTAGTAAGACCAGCTTTAGCAGCAGCATGAAGTAGAGATCAAAGG
TCTGACGATTCAGGGAGGCCAGTGTAAAGCAAAATCTCCCAAAATATGGGGTAGTCCTAC
CCATCTCATTCCTTTCTAGATCATAAAATCCATCAGAAAGCGCTGCAACTGCCTTGTGGA
CTGAAGTGTCCCTGGCAACTGGGATAATACCAGCACGATGGAAGCACTCAGTCAGTATTT
GTTGAATGAATGAACAATTGAATAGGTGGATAGACAGATAACTGAATTCTGCCTTTTGAT
AACTGGAAAAAAATCAGGAATTGATGTTATACTAATTGGCACTACAGTTTCTACACAGAA
CCAGAATTGACTCTTCATAAATATTTTTTAGAGAAGTGAATCAATGACTTTGAAGTCTTT
AAGGGTTTGGGAAAATTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-619, gnl|bosTau2|chr5 (7909392-7910022)
               

               
               1-619, gnl|Hg17|chr12 (79690844-79690238)
               

               
               1-619, gnl|Mm7|chr10 (106885697-106886227)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-619, gnl|bosTau2|chr5 (7909392-7910022)
               

               
               1-619, gnl|Hg17|chr12 (79690844-79690238)
               

               
               1-619, gnl|Mm7|chr10 (106885697-106886227)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-619, gnl\|bosTau2\|chr5 (7909392-7910022)
	1-619, gnl\|Hg17\|chr12 (79690844-79690238)
	1-619, gnl\|Mm7\|chr10 (106885697-106886227)