Non-Coding RNA Search

rtes14_b7.y1

Sequence:


               
               TACTTTCGGCTCCGAAGGAGGAAGAGCTGTATGGGAGGAGCTTTTCACTTCTCGCTTCTA
CCTTTTTATTGGCTACTCGATGACTTTTACAGCCTGTCACTGATACAGGAAGAGACGGCG
GAGAGCCTGGGAGAGCTACATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTTCGGCTCCGAAGGAGGAAGAGCTGTATGGGAGGAGCTTTTCACTTCTCGCTTCTA
CCTTTTTATTGGCTACTCGATGACTTTTACAGCCTGTCACTGATACAGGAAGAGACGGCG
GAGAGCCTGGGAGAGCTACATTA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-143, gnl|bosTau2|chr21 (29669492-29669633)
               

               
               1-143, gnl|canFam2|chr8 (16698945-16699309)
               

               
               1-143, gnl|dasNov1|scaffold_33903 (16473-16124)
               

               
               1-143, gnl|hg17|chr14 (34414266-34414625)
               

               
               1-143, gnl|Hg17|chr14 (34414301-34414442)
               

               
               1-143, gnl|loxAfr1|scaffold_6709 (57456-57098)
               

               
               1-143, gnl|mm7|chr12 (52954658-52955025)
               

               
               1-143, gnl|Mm7|chr12 (52954693-52954834)
               

               
               1-143, gnl|monDom2|scaffold_73 (3502531-3502199)
               

               
               1-143, gnl|panTro1|chr15 (33570667-33571026)
               

               
               1-143, gnl|rheMac2|chr7 (97840935-97841294)
               

               
               1-143, gnl|rn3|chr6 (75336761-75337128)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-143, gnl|bosTau2|chr21 (29669492-29669633)
               

               
               1-143, gnl|canFam2|chr8 (16698945-16699309)
               

               
               1-143, gnl|dasNov1|scaffold_33903 (16473-16124)
               

               
               1-143, gnl|hg17|chr14 (34414266-34414625)
               

               
               1-143, gnl|Hg17|chr14 (34414301-34414442)
               

               
               1-143, gnl|loxAfr1|scaffold_6709 (57456-57098)
               

               
               1-143, gnl|mm7|chr12 (52954658-52955025)
               

               
               1-143, gnl|Mm7|chr12 (52954693-52954834)
               

               
               1-143, gnl|monDom2|scaffold_73 (3502531-3502199)
               

               
               1-143, gnl|panTro1|chr15 (33570667-33571026)
               

               
               1-143, gnl|rheMac2|chr7 (97840935-97841294)
               

               
               1-143, gnl|rn3|chr6 (75336761-75337128)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-143, gnl\|bosTau2\|chr21 (29669492-29669633)
	1-143, gnl\|canFam2\|chr8 (16698945-16699309)
	1-143, gnl\|dasNov1\|scaffold_33903 (16473-16124)
	1-143, gnl\|hg17\|chr14 (34414266-34414625)
	1-143, gnl\|Hg17\|chr14 (34414301-34414442)
	1-143, gnl\|loxAfr1\|scaffold_6709 (57456-57098)
	1-143, gnl\|mm7\|chr12 (52954658-52955025)
	1-143, gnl\|Mm7\|chr12 (52954693-52954834)
	1-143, gnl\|monDom2\|scaffold_73 (3502531-3502199)
	1-143, gnl\|panTro1\|chr15 (33570667-33571026)
	1-143, gnl\|rheMac2\|chr7 (97840935-97841294)
	1-143, gnl\|rn3\|chr6 (75336761-75337128)