Non-Coding RNA Search

rtes22_k2.y1

Sequence:


               
               GAAGAAACACAAAAAAAAGCTGAAGAAACAAGCCTCCTTAGACACATCTGGTAATGATAT
AGAAAACCAGTCCGTTTATGACATTGACCAAATACTCTTCAAACTGGTGGCCACAACATC
AATGATGACCAAGTACCTGAATCAGGTGTCCCACCACCCTCCAGCTAAGAAAGTCAAGCA
CCGAAAACTAAAGAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAAACACAAAAAAAAGCTGAAGAAACAAGCCTCCTTAGACACATCTGGTAATGATAT
AGAAAACCAGTCCGTTTATGACATTGACCAAATACTCTTCAAACTGGTGGCCACAACATC
AATGATGACCAAGTACCTGAATCAGGTGTCCCACCACCCTCCAGCTAAGAAAGTCAAGCA
CCGAAAACTAAAGAGGAA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               18-198, gnl|bosTau2|chr16 (41888522-41888342)
               

               
               18-198, gnl|canFam2|chr7 (28503037-28502769)
               

               
               18-198, gnl|echTel1|scaffold_314472 (7825-8085)
               

               
               18-198, gnl|hg17|chr1 (170337546-170337840)
               

               
               18-198, gnl|Hg17|chr1 (170337621-170337801)
               

               
               18-198, gnl|mm7|chr1 (161119728-161119478)
               

               
               18-198, gnl|Mm7|chr1 (161119709-161119523)
               

               
               18-198, gnl|monDom2|scaffold_16 (24958964-24959252)
               

               
               18-198, gnl|panTro1|chr1 (152707632-152707926)
               

               
               18-198, gnl|rheMac2|chr1 (203283709-203284003)
               

               
               18-198, gnl|rn3|chr13 (76744865-76744615)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-198, gnl|bosTau2|chr16 (41888522-41888342)
               

               
               18-198, gnl|canFam2|chr7 (28503037-28502769)
               

               
               18-198, gnl|echTel1|scaffold_314472 (7825-8085)
               

               
               18-198, gnl|hg17|chr1 (170337546-170337840)
               

               
               18-198, gnl|Hg17|chr1 (170337621-170337801)
               

               
               18-198, gnl|mm7|chr1 (161119728-161119478)
               

               
               18-198, gnl|Mm7|chr1 (161119709-161119523)
               

               
               18-198, gnl|monDom2|scaffold_16 (24958964-24959252)
               

               
               18-198, gnl|panTro1|chr1 (152707632-152707926)
               

               
               18-198, gnl|rheMac2|chr1 (203283709-203284003)
               

               
               18-198, gnl|rn3|chr13 (76744865-76744615)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	18-198, gnl\|bosTau2\|chr16 (41888522-41888342)
	18-198, gnl\|canFam2\|chr7 (28503037-28502769)
	18-198, gnl\|echTel1\|scaffold_314472 (7825-8085)
	18-198, gnl\|hg17\|chr1 (170337546-170337840)
	18-198, gnl\|Hg17\|chr1 (170337621-170337801)
	18-198, gnl\|mm7\|chr1 (161119728-161119478)
	18-198, gnl\|Mm7\|chr1 (161119709-161119523)
	18-198, gnl\|monDom2\|scaffold_16 (24958964-24959252)
	18-198, gnl\|panTro1\|chr1 (152707632-152707926)
	18-198, gnl\|rheMac2\|chr1 (203283709-203284003)
	18-198, gnl\|rn3\|chr13 (76744865-76744615)