Non-Coding RNA Search

rtes24_e20r1.y1

Sequence:


               
               AAGTAACTTAACCAACCCTCCATAAATCTCCATTTCCTCACCTGTACGGAGGGACTAAAA
TCGGAACAGCTTTGTAGCGTTATATAAGTATCAAATAAGAAAATGGAAAGTTATTAGCGC
AGTGCCTGGTGTAAAGTGTGTGGTAAATGTTCTTTATATCAAATAGTAGGTCTTGCATTT
ATTGAGCTTATGCTAATCTTCTACTGGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTAACTTAACCAACCCTCCATAAATCTCCATTTCCTCACCTGTACGGAGGGACTAAAA
TCGGAACAGCTTTGTAGCGTTATATAAGTATCAAATAAGAAAATGGAAAGTTATTAGCGC
AGTGCCTGGTGTAAAGTGTGTGGTAAATGTTCTTTATATCAAATAGTAGGTCTTGCATTT
ATTGAGCTTATGCTAATCTTCTACTGGGTG

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-182, gnl|bosTau2|chr3 (22289852-22289670)
               

               
               1-182, gnl|canFam2|chr17 (58022188-58022470)
               

               
               1-182, gnl|dasNov1|scaffold_187623 (979-1254)
               

               
               1-182, gnl|echTel1|scaffold_36951 (977-680)
               

               
               1-182, gnl|hg17|chr1 (117859513-117859829)
               

               
               1-182, gnl|Hg17|chr1 (117859837-117859639)
               

               
               1-182, gnl|loxAfr1|scaffold_8062 (65054-65354)
               

               
               1-182, gnl|mm7|chr3 (100285403-100285133)
               

               
               1-182, gnl|oryCun1|scaffold_214171 (192183-191882)
               

               
               1-182, gnl|panTro1|chr1 (117703333-117703650)
               

               
               1-182, gnl|rheMac2|chr1 (120580794-120581109)
               

               
               1-182, gnl|rn3|chr2 (195446046-195445795)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-182, gnl|bosTau2|chr3 (22289852-22289670)
               

               
               1-182, gnl|canFam2|chr17 (58022188-58022470)
               

               
               1-182, gnl|dasNov1|scaffold_187623 (979-1254)
               

               
               1-182, gnl|echTel1|scaffold_36951 (977-680)
               

               
               1-182, gnl|hg17|chr1 (117859513-117859829)
               

               
               1-182, gnl|Hg17|chr1 (117859837-117859639)
               

               
               1-182, gnl|loxAfr1|scaffold_8062 (65054-65354)
               

               
               1-182, gnl|mm7|chr3 (100285403-100285133)
               

               
               1-182, gnl|oryCun1|scaffold_214171 (192183-191882)
               

               
               1-182, gnl|panTro1|chr1 (117703333-117703650)
               

               
               1-182, gnl|rheMac2|chr1 (120580794-120581109)
               

               
               1-182, gnl|rn3|chr2 (195446046-195445795)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-182, gnl\|bosTau2\|chr3 (22289852-22289670)
	1-182, gnl\|canFam2\|chr17 (58022188-58022470)
	1-182, gnl\|dasNov1\|scaffold_187623 (979-1254)
	1-182, gnl\|echTel1\|scaffold_36951 (977-680)
	1-182, gnl\|hg17\|chr1 (117859513-117859829)
	1-182, gnl\|Hg17\|chr1 (117859837-117859639)
	1-182, gnl\|loxAfr1\|scaffold_8062 (65054-65354)
	1-182, gnl\|mm7\|chr3 (100285403-100285133)
	1-182, gnl\|oryCun1\|scaffold_214171 (192183-191882)
	1-182, gnl\|panTro1\|chr1 (117703333-117703650)
	1-182, gnl\|rheMac2\|chr1 (120580794-120581109)
	1-182, gnl\|rn3\|chr2 (195446046-195445795)