Non-Coding RNA Search

rtes24_j22.y1

Sequence:


               
               TCGCAGAAAGGAACACCCGCTGGTGGGCGCTGCTTTGCTAGTCAGGCCTCAGATGCAAAG
GCCAGGACGCAGAAGCCTGCGGTGCAAACGGGCAGCTCAGAGTAGTTGCATCAATCACAC
AGGATGGATTAAAAAAAAAGTTCTATGCATCGGGATGATGCCGTGTGTAAACAGAACACC
CAGGGCGCTCCATTCAGCGCCCCAAAGAGGATAATGTCTTGCAGCTATATCACCAGCAAA
GAAGAGTCTGCCCTGGACGAATAGAAGACTAAGTGTGATTAAGCTATTAAGTATTTTTAA
TTACCTCTTACTATTCTTTGGATACAGTATATTTTTGAGGAAGCAGAAGCAGAATTGAAG
TACCTTGATATTATAGAGCTTTATAGAGCAAGCATATGGACTTGGCTTATTCATCGTAAT
TGGCAGAGGTTCTGCTGTACAGAATCTGCAGCAATACCTCAATTTTCTTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGCAGAAAGGAACACCCGCTGGTGGGCGCTGCTTTGCTAGTCAGGCCTCAGATGCAAAG
GCCAGGACGCAGAAGCCTGCGGTGCAAACGGGCAGCTCAGAGTAGTTGCATCAATCACAC
AGGATGGATTAAAAAAAAAGTTCTATGCATCGGGATGATGCCGTGTGTAAACAGAACACC
CAGGGCGCTCCATTCAGCGCCCCAAAGAGGATAATGTCTTGCAGCTATATCACCAGCAAA
GAAGAGTCTGCCCTGGACGAATAGAAGACTAAGTGTGATTAAGCTATTAAGTATTTTTAA
TTACCTCTTACTATTCTTTGGATACAGTATATTTTTGAGGAAGCAGAAGCAGAATTGAAG
TACCTTGATATTATAGAGCTTTATAGAGCAAGCATATGGACTTGGCTTATTCATCGTAAT
TGGCAGAGGTTCTGCTGTACAGAATCTGCAGCAATACCTCAATTTTCTTGCT

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               3-190, gnl|bosTau2|chr6 (55292796-55292999)
               

               
               3-190, gnl|Hg17|chr4 (85793247-85793054)
               


               
               212-472, gnl|bosTau2|chr6 (55299094-55299348)
               

               
               212-472, gnl|Hg17|chr4 (85789719-85789458)
               

               
               212-472, gnl|Mm7|chr5 (100903361-100902925)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-190, gnl|bosTau2|chr6 (55292796-55292999)
               

               
               3-190, gnl|Hg17|chr4 (85793247-85793054)
               


               
               212-472, gnl|bosTau2|chr6 (55299094-55299348)
               

               
               212-472, gnl|Hg17|chr4 (85789719-85789458)
               

               
               212-472, gnl|Mm7|chr5 (100903361-100902925)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	3-190, gnl\|bosTau2\|chr6 (55292796-55292999)
	3-190, gnl\|Hg17\|chr4 (85793247-85793054)

	212-472, gnl\|bosTau2\|chr6 (55299094-55299348)
	212-472, gnl\|Hg17\|chr4 (85789719-85789458)
	212-472, gnl\|Mm7\|chr5 (100903361-100902925)