Non-Coding RNA Search

rtes29_m23.y1

Sequence:


               
               ACCAGAGGCTAGGAGCCCCTTGTCGGGAGGCCGAGTGGGCTAGCGAAAAAGGAAAGTTTC
CGGAATCTTGAACGCGGAATAAGAGGTCGCCAGGCCTGCTGGGAGATTACCTCCAATATT
CCAGGGCCTTCTTCCTCATCTCTGTCTTTACCATACTTGTTGTCCTTGTCTGGCTCCTGC
GCTCTTGCCTCCCTAAAAGAGAAAGCATGGCTGCTAACTTGGATCTGAAGGTATCCGTGC
TCACCTTCATCTCAGGTTCGTGAGCATACTAGGGGTGCCATGGAGTCAAATTTACTATGG
ACCTATTATCTTACCTGGGGGAGTGACTTATTATACACATTTGCAGGGATCCTCTTCTTC
CTCAACTACATAACTTCCAGAGCTCCTCCCCTTGATCAAAATGTCTCTGCAGTCCCCATA
GAGAAGTCAAGGCTGGGAATTGGTCCAGTGACTACAGTATCGCCTGCTGAAGATGAGGAG
TTAAGGTCTCCGATAGAATCTACAAGTGAAAGAGAGACAAAACTACCAAGTGCAGAACTG
TGACGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAGAGGCTAGGAGCCCCTTGTCGGGAGGCCGAGTGGGCTAGCGAAAAAGGAAAGTTTC
CGGAATCTTGAACGCGGAATAAGAGGTCGCCAGGCCTGCTGGGAGATTACCTCCAATATT
CCAGGGCCTTCTTCCTCATCTCTGTCTTTACCATACTTGTTGTCCTTGTCTGGCTCCTGC
GCTCTTGCCTCCCTAAAAGAGAAAGCATGGCTGCTAACTTGGATCTGAAGGTATCCGTGC
TCACCTTCATCTCAGGTTCGTGAGCATACTAGGGGTGCCATGGAGTCAAATTTACTATGG
ACCTATTATCTTACCTGGGGGAGTGACTTATTATACACATTTGCAGGGATCCTCTTCTTC
CTCAACTACATAACTTCCAGAGCTCCTCCCCTTGATCAAAATGTCTCTGCAGTCCCCATA
GAGAAGTCAAGGCTGGGAATTGGTCCAGTGACTACAGTATCGCCTGCTGAAGATGAGGAG
TTAAGGTCTCCGATAGAATCTACAAGTGAAAGAGAGACAAAACTACCAAGTGCAGAACTG
TGACGGCG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|29740252|ref|XP_294751.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|29740252|ref|XP_294751.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               100-257, gnl|bosTau2|chr10 (10792571-10792728)
               

               
               100-257, gnl|Hg17|chr15 (70485990-70486148)
               

               
               100-257, gnl|Mm7|chr9 (59547172-59547014)
               


               
               345-544, gnl|bosTau2|chr10 (10794121-10794313)
               

               
               345-544, gnl|Hg17|chr15 (70487084-70487283)
               

               
               345-544, gnl|Mm7|chr9 (59546203-59545980)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-257, gnl|bosTau2|chr10 (10792571-10792728)
               

               
               100-257, gnl|Hg17|chr15 (70485990-70486148)
               

               
               100-257, gnl|Mm7|chr9 (59547172-59547014)
               


               
               345-544, gnl|bosTau2|chr10 (10794121-10794313)
               

               
               345-544, gnl|Hg17|chr15 (70487084-70487283)
               

               
               345-544, gnl|Mm7|chr9 (59546203-59545980)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tes (0.207814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	100-257, gnl\|bosTau2\|chr10 (10792571-10792728)
	100-257, gnl\|Hg17\|chr15 (70485990-70486148)
	100-257, gnl\|Mm7\|chr9 (59547172-59547014)

	345-544, gnl\|bosTau2\|chr10 (10794121-10794313)
	345-544, gnl\|Hg17\|chr15 (70487084-70487283)
	345-544, gnl\|Mm7\|chr9 (59546203-59545980)