Non-Coding RNA Search

rtes29_n15.y1

Sequence:


               
               GTCTATCTCCCGAGAATGGCATGGATACAAAAAGAAGAACCAAACTATTAGTGTAGGAAA
AGACATTAACTGCGACGTGATGATTCACAGAGATCACAAGAAAGAAGTGCGCGCCCCTTC
TCCCTACTGGACGATGGTGAAGCAGGACAACGAGAGCTCCTCCTCCTCCGTCTCCACTAC
CTCCGATGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTATCTCCCGAGAATGGCATGGATACAAAAAGAAGAACCAAACTATTAGTGTAGGAAA
AGACATTAACTGCGACGTGATGATTCACAGAGATCACAAGAAAGAAGTGCGCGCCCCTTC
TCCCTACTGGACGATGGTGAAGCAGGACAACGAGAGCTCCTCCTCCTCCGTCTCCACTAC
CTCCGATGCA

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               1-190, gnl|bosTau2|chr25 (17959307-17959499)
               

               
               1-190, gnl|canFam2|chr6 (26655387-26654888)
               

               
               1-190, gnl|dasNov1|scaffold_16063 (13156-13621)
               

               
               1-190, gnl|echTel1|scaffold_256303 (2941-2454)
               

               
               1-190, gnl|hg17|chr16 (21903043-21903543)
               

               
               1-190, gnl|Hg17|chr16 (21903344-21903155)
               

               
               1-190, gnl|mm7|chr7 (116582190-116582701)
               

               
               1-190, gnl|Mm7|chr7 (116582513-116582312)
               

               
               1-190, gnl|monDom2|scaffold_19 (42360092-42360603)
               

               
               1-190, gnl|oryCun1|scaffold_176507 (27606-27126)
               

               
               1-190, gnl|panTro1|chr18_random (10062999-10063500)
               

               
               1-190, gnl|rheMac2|chr20 (20395216-20395715)
               

               
               1-190, gnl|rn3|chr1 (179629989-179630494)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-190, gnl|bosTau2|chr25 (17959307-17959499)
               

               
               1-190, gnl|canFam2|chr6 (26655387-26654888)
               

               
               1-190, gnl|dasNov1|scaffold_16063 (13156-13621)
               

               
               1-190, gnl|echTel1|scaffold_256303 (2941-2454)
               

               
               1-190, gnl|hg17|chr16 (21903043-21903543)
               

               
               1-190, gnl|Hg17|chr16 (21903344-21903155)
               

               
               1-190, gnl|mm7|chr7 (116582190-116582701)
               

               
               1-190, gnl|Mm7|chr7 (116582513-116582312)
               

               
               1-190, gnl|monDom2|scaffold_19 (42360092-42360603)
               

               
               1-190, gnl|oryCun1|scaffold_176507 (27606-27126)
               

               
               1-190, gnl|panTro1|chr18_random (10062999-10063500)
               

               
               1-190, gnl|rheMac2|chr20 (20395216-20395715)
               

               
               1-190, gnl|rn3|chr1 (179629989-179630494)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-190, gnl\|bosTau2\|chr25 (17959307-17959499)
	1-190, gnl\|canFam2\|chr6 (26655387-26654888)
	1-190, gnl\|dasNov1\|scaffold_16063 (13156-13621)
	1-190, gnl\|echTel1\|scaffold_256303 (2941-2454)
	1-190, gnl\|hg17\|chr16 (21903043-21903543)
	1-190, gnl\|Hg17\|chr16 (21903344-21903155)
	1-190, gnl\|mm7\|chr7 (116582190-116582701)
	1-190, gnl\|Mm7\|chr7 (116582513-116582312)
	1-190, gnl\|monDom2\|scaffold_19 (42360092-42360603)
	1-190, gnl\|oryCun1\|scaffold_176507 (27606-27126)
	1-190, gnl\|panTro1\|chr18_random (10062999-10063500)
	1-190, gnl\|rheMac2\|chr20 (20395216-20395715)
	1-190, gnl\|rn3\|chr1 (179629989-179630494)