Non-Coding RNA Search

rtes33_i14.y1

Sequence:


               
               GGAAATATTCCTAAACAAGTTCTAAGGAAGAATCAAATAGAATCATTATTTTACAGCATA
ACCTCATTAAGCCAATGTTGTTTTATTTGAAATAGTATGATTCAAAGAAAAATTGTACTC
CTTAGCCAACTAAATGTAACATTGTTAGCTAATAAATAAGTGGAATAACCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAATATTCCTAAACAAGTTCTAAGGAAGAATCAAATAGAATCATTATTTTACAGCATA
ACCTCATTAAGCCAATGTTGTTTTATTTGAAATAGTATGATTCAAAGAAAAATTGTACTC
CTTAGCCAACTAAATGTAACATTGTTAGCTAATAAATAAGTGGAATAACCC

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               41-171, gnl|bosTau2|chr10 (64514345-64514215)
               

               
               41-171, gnl|canFam2|chr8 (58238831-58239055)
               

               
               41-171, gnl|echTel1|scaffold_291177 (13911-14138)
               

               
               41-171, gnl|galGal2|chr5 (38278616-38278862)
               

               
               41-171, gnl|hg17|chr14 (82652795-82653016)
               

               
               41-171, gnl|Hg17|chr14 (82652880-82653008)
               

               
               41-171, gnl|loxAfr1|scaffold_425 (199048-198794)
               

               
               41-171, gnl|mm7|chr12 (90887305-90887504)
               

               
               41-171, gnl|Mm7|chr12 (90887371-90887497)
               

               
               41-171, gnl|oryCun1|scaffold_100 (321-123)
               

               
               41-171, gnl|panTro1|chr15 (82768455-82768677)
               

               
               41-171, gnl|rheMac2|chr7 (146308078-146308299)
               

               
               41-171, gnl|rn3|chr6 (117149473-117149686)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-171, gnl|bosTau2|chr10 (64514345-64514215)
               

               
               41-171, gnl|canFam2|chr8 (58238831-58239055)
               

               
               41-171, gnl|echTel1|scaffold_291177 (13911-14138)
               

               
               41-171, gnl|galGal2|chr5 (38278616-38278862)
               

               
               41-171, gnl|hg17|chr14 (82652795-82653016)
               

               
               41-171, gnl|Hg17|chr14 (82652880-82653008)
               

               
               41-171, gnl|loxAfr1|scaffold_425 (199048-198794)
               

               
               41-171, gnl|mm7|chr12 (90887305-90887504)
               

               
               41-171, gnl|Mm7|chr12 (90887371-90887497)
               

               
               41-171, gnl|oryCun1|scaffold_100 (321-123)
               

               
               41-171, gnl|panTro1|chr15 (82768455-82768677)
               

               
               41-171, gnl|rheMac2|chr7 (146308078-146308299)
               

               
               41-171, gnl|rn3|chr6 (117149473-117149686)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	41-171, gnl\|bosTau2\|chr10 (64514345-64514215)
	41-171, gnl\|canFam2\|chr8 (58238831-58239055)
	41-171, gnl\|echTel1\|scaffold_291177 (13911-14138)
	41-171, gnl\|galGal2\|chr5 (38278616-38278862)
	41-171, gnl\|hg17\|chr14 (82652795-82653016)
	41-171, gnl\|Hg17\|chr14 (82652880-82653008)
	41-171, gnl\|loxAfr1\|scaffold_425 (199048-198794)
	41-171, gnl\|mm7\|chr12 (90887305-90887504)
	41-171, gnl\|Mm7\|chr12 (90887371-90887497)
	41-171, gnl\|oryCun1\|scaffold_100 (321-123)
	41-171, gnl\|panTro1\|chr15 (82768455-82768677)
	41-171, gnl\|rheMac2\|chr7 (146308078-146308299)
	41-171, gnl\|rn3\|chr6 (117149473-117149686)