Non-Coding RNA Search

rtes36_l6r1.y1

Sequence:


               
               TGCATATCATTTCTAGTTTACTAATTTTCCTAAACATTTCCATACTCCAAAATACAGGTA
CAAATGAATTGTATCATAGGATACTAAGTGACCTGAAAGTGTTCATTTAGTTTCCCAAGA
AAACAGCATCACTCTTTCAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCATATCATTTCTAGTTTACTAATTTTCCTAAACATTTCCATACTCCAAAATACAGGTA
CAAATGAATTGTATCATAGGATACTAAGTGACCTGAAAGTGTTCATTTAGTTTCCCAAGA
AAACAGCATCACTCTTTCAGAG

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-140, gnl|bosTau2|chr8 (22998969-22998830)
               

               
               1-140, gnl|canFam2|chr1 (88752491-88752028)
               

               
               1-140, gnl|echTel1|scaffold_82588 (4149-4602)
               

               
               1-140, gnl|hg17|chr9 (71896042-71896507)
               

               
               1-140, gnl|Hg17|chr9 (71896457-71896322)
               

               
               1-140, gnl|loxAfr1|scaffold_16444 (22463-22936)
               

               
               1-140, gnl|mm7|chr19 (21256793-21256394)
               

               
               1-140, gnl|oryCun1|scaffold_176943 (17634-18093)
               

               
               1-140, gnl|panTro1|chr11 (55720316-55720781)
               

               
               1-140, gnl|rheMac2|chr15 (80816920-80817391)
               

               
               1-140, gnl|rn3|chr1 (224929779-224929401)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-140, gnl|bosTau2|chr8 (22998969-22998830)
               

               
               1-140, gnl|canFam2|chr1 (88752491-88752028)
               

               
               1-140, gnl|echTel1|scaffold_82588 (4149-4602)
               

               
               1-140, gnl|hg17|chr9 (71896042-71896507)
               

               
               1-140, gnl|Hg17|chr9 (71896457-71896322)
               

               
               1-140, gnl|loxAfr1|scaffold_16444 (22463-22936)
               

               
               1-140, gnl|mm7|chr19 (21256793-21256394)
               

               
               1-140, gnl|oryCun1|scaffold_176943 (17634-18093)
               

               
               1-140, gnl|panTro1|chr11 (55720316-55720781)
               

               
               1-140, gnl|rheMac2|chr15 (80816920-80817391)
               

               
               1-140, gnl|rn3|chr1 (224929779-224929401)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-140, gnl\|bosTau2\|chr8 (22998969-22998830)
	1-140, gnl\|canFam2\|chr1 (88752491-88752028)
	1-140, gnl\|echTel1\|scaffold_82588 (4149-4602)
	1-140, gnl\|hg17\|chr9 (71896042-71896507)
	1-140, gnl\|Hg17\|chr9 (71896457-71896322)
	1-140, gnl\|loxAfr1\|scaffold_16444 (22463-22936)
	1-140, gnl\|mm7\|chr19 (21256793-21256394)
	1-140, gnl\|oryCun1\|scaffold_176943 (17634-18093)
	1-140, gnl\|panTro1\|chr11 (55720316-55720781)
	1-140, gnl\|rheMac2\|chr15 (80816920-80817391)
	1-140, gnl\|rn3\|chr1 (224929779-224929401)