rtes40_a23.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTCAAAGGTATTTAATGGATGTCCCTTGAAAATTCACTGTGCAACATCATGGATAAA CCCAGACACAAGAGATCAGTACTTGATATTTGGTGCTGAAGAAGGGATTTATACCTTAAA TCTCAATGAACTTCATGAAACATCAATGGAACAGCTGTTTCCCCGAAGGTGTACATGGTT GTATGTAATGAACAATTGCCTACTATCAATATCTGGTAAAGCTTCTCAACTTTATTCCCA TAATTTACCAGGGCTTTTTGATTATGCAAGGCAAATGCAAAAGTTACCTGTTTCTATTCC AGCACACAAACTCCCTGACAGAATACTGCCAAGGAAATTTGCTGTATCAGCAAAAATCCC TGAAACCAAATGGTGTCAGAAGTGTTGTGTTGTGAGAAATCCTTACACAGGCCATAAATA CCTTTGTGGGGCACTTCAGACTAGCATTGTTCTATTAGAATGGGTTGAACCAATGCAGAA ATTTATGTTAATTAAGCACATAGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTCAAAGGTATTTAATGGATGTCCCTTGAAAATTCACTGTGCAACATCATGGATAAA CCCAGACACAAGAGATCAGTACTTGATATTTGGTGCTGAAGAAGGGATTTATACCTTAAA TCTCAATGAACTTCATGAAACATCAATGGAACAGCTGTTTCCCCGAAGGTGTACATGGTT GTATGTAATGAACAATTGCCTACTATCAATATCTGGTAAAGCTTCTCAACTTTATTCCCA TAATTTACCAGGGCTTTTTGATTATGCAAGGCAAATGCAAAAGTTACCTGTTTCTATTCC AGCACACAAACTCCCTGACAGAATACTGCCAAGGAAATTTGCTGTATCAGCAAAAATCCC TGAAACCAAATGGTGTCAGAAGTGTTGTGTTGTGAGAAATCCTTACACAGGCCATAAATA CCTTTGTGGGGCACTTCAGACTAGCATTGTTCTATTAGAATGGGTTGAACCAATGCAGAA ATTTATGTTAATTAAGCACATAGAT |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 215-339, gnl|bosTau2|chr11 (16512071-16511947) | |
| 215-339, gnl|canFam2|chr17 (34377441-34377570) | |
| 215-339, gnl|danRer3|chr13 (39408397-39408519) | |
| 215-339, gnl|dasNov1|scaffold_23087 (3455-3584) | |
| 215-339, gnl|fr1|chrUn (99259086-99259213) | |
| 215-339, gnl|galGal2|chrUn (121300463-121300590) | |
| 215-339, gnl|hg17|chr2 (39411067-39411196) | |
| 215-339, gnl|Hg17|chr2 (39411193-39411069) | |
| 215-339, gnl|loxAfr1|scaffold_9220 (34298-34169) | |
| 215-339, gnl|mm7|chr17 (78901473-78901601) | |
| 215-339, gnl|Mm7|chr17 (78901598-78901478) | |
| 215-339, gnl|monDom2|scaffold_23 (42609026-42609155) | |
| 215-339, gnl|oryCun1|scaffold_168223 (4342-4471) | |
| 215-339, gnl|panTro1|chr12 (40908108-40908237) | |
| 215-339, gnl|rheMac2|chr13 (39277244-39277373) | |
| 215-339, gnl|rn3|chr6 (3493444-3493574) | |
| 215-339, gnl|tetNig1|chr10 (11298280-11298154) | |
| 215-339, gnl|xenTro1|scaffold_41 (1529072-1528943) | |
| 392-496, gnl|bosTau2|chr11 (16509264-16509160) | |
| 392-496, gnl|canFam2|chr17 (34371885-34371972) | |
| 392-496, gnl|danRer3|chr13 (39407263-39407355) | |
| 392-496, gnl|dasNov1|scaffold_40140 (31303-31391) | |
| 392-496, gnl|echTel1|scaffold_278949 (58730-58817) | |
| 392-496, gnl|fr1|chrUn (2736012-2735925) | |
| 392-496, gnl|galGal2|chrUn (121295316-121295399) | |
| 392-496, gnl|hg17|chr2 (39403988-39404075) | |
| 392-496, gnl|Hg17|chr2 (39404099-39403995) | |
| 392-496, gnl|loxAfr1|scaffold_9220 (41552-41465) | |
| 392-496, gnl|mm7|chr17 (78897899-78897986) | |
| 392-496, gnl|Mm7|chr17 (78898010-78897906) | |
| 392-496, gnl|monDom2|scaffold_23 (42603731-42603818) | |
| 392-496, gnl|oryCun1|scaffold_101687 (10272-10359) | |
| 392-496, gnl|panTro1|chr12 (40900893-40900980) | |
| 392-496, gnl|rheMac2|chr13 (39269999-39270086) | |
| 392-496, gnl|rn3|chr6 (3489023-3489110) | |
| 392-496, gnl|tetNig1|chr10 (11298629-11298542) | |
| 392-496, gnl|xenTro1|scaffold_41 (1531267-1531184) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 215-339, gnl|bosTau2|chr11 (16512071-16511947) | |
| 215-339, gnl|canFam2|chr17 (34377441-34377570) | |
| 215-339, gnl|danRer3|chr13 (39408397-39408519) | |
| 215-339, gnl|dasNov1|scaffold_23087 (3455-3584) | |
| 215-339, gnl|fr1|chrUn (99259086-99259213) | |
| 215-339, gnl|galGal2|chrUn (121300463-121300590) | |
| 215-339, gnl|hg17|chr2 (39411067-39411196) | |
| 215-339, gnl|Hg17|chr2 (39411193-39411069) | |
| 215-339, gnl|loxAfr1|scaffold_9220 (34298-34169) | |
| 215-339, gnl|mm7|chr17 (78901473-78901601) | |
| 215-339, gnl|Mm7|chr17 (78901598-78901478) | |
| 215-339, gnl|monDom2|scaffold_23 (42609026-42609155) | |
| 215-339, gnl|oryCun1|scaffold_168223 (4342-4471) | |
| 215-339, gnl|panTro1|chr12 (40908108-40908237) | |
| 215-339, gnl|rheMac2|chr13 (39277244-39277373) | |
| 215-339, gnl|rn3|chr6 (3493444-3493574) | |
| 215-339, gnl|tetNig1|chr10 (11298280-11298154) | |
| 215-339, gnl|xenTro1|scaffold_41 (1529072-1528943) | |
| 392-496, gnl|bosTau2|chr11 (16509264-16509160) | |
| 392-496, gnl|canFam2|chr17 (34371885-34371972) | |
| 392-496, gnl|danRer3|chr13 (39407263-39407355) | |
| 392-496, gnl|dasNov1|scaffold_40140 (31303-31391) | |
| 392-496, gnl|echTel1|scaffold_278949 (58730-58817) | |
| 392-496, gnl|fr1|chrUn (2736012-2735925) | |
| 392-496, gnl|galGal2|chrUn (121295316-121295399) | |
| 392-496, gnl|hg17|chr2 (39403988-39404075) | |
| 392-496, gnl|Hg17|chr2 (39404099-39403995) | |
| 392-496, gnl|loxAfr1|scaffold_9220 (41552-41465) | |
| 392-496, gnl|mm7|chr17 (78897899-78897986) | |
| 392-496, gnl|Mm7|chr17 (78898010-78897906) | |
| 392-496, gnl|monDom2|scaffold_23 (42603731-42603818) | |
| 392-496, gnl|oryCun1|scaffold_101687 (10272-10359) | |
| 392-496, gnl|panTro1|chr12 (40900893-40900980) | |
| 392-496, gnl|rheMac2|chr13 (39269999-39270086) | |
| 392-496, gnl|rn3|chr6 (3489023-3489110) | |
| 392-496, gnl|tetNig1|chr10 (11298629-11298542) | |
| 392-496, gnl|xenTro1|scaffold_41 (1531267-1531184) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |