Non-Coding RNA Search

rtes40_f17.y1

Sequence:


               
               CCTCTGCATTTGTGATGGCACTACCTGGACAAAGGTTGGATGGGAGATTTTTCCAGAAGA
AATGCATTATCTGAAAGTTAAGCCTCCTCCATCCCACTGTTTACCTTACCCTCTGGACAA
ACTATGCTGCAGTTTTGCTAATACGGACATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCTGCATTTGTGATGGCACTACCTGGACAAAGGTTGGATGGGAGATTTTTCCAGAAGA
AATGCATTATCTGAAAGTTAAGCCTCCTCCATCCCACTGTTTACCTTACCCTCTGGACAA
ACTATGCTGCAGTTTTGCTAATACGGACATAT

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               3-152, gnl|bosTau2|chr16 (41889669-41889520)
               

               
               3-152, gnl|canFam2|chr7 (28504249-28503871)
               

               
               3-152, gnl|dasNov1|scaffold_67187 (3684-4053)
               

               
               3-152, gnl|echTel1|scaffold_314472 (6638-7014)
               

               
               3-152, gnl|hg17|chr1 (170336295-170336675)
               

               
               3-152, gnl|Hg17|chr1 (170336382-170336531)
               

               
               3-152, gnl|loxAfr1|scaffold_23994 (23766-24146)
               

               
               3-152, gnl|mm7|chr1 (161121591-161121197)
               

               
               3-152, gnl|Mm7|chr1 (161121485-161121336)
               

               
               3-152, gnl|monDom2|scaffold_16 (24955126-24955488)
               

               
               3-152, gnl|panTro1|chr1 (152706381-152706761)
               

               
               3-152, gnl|rheMac2|chr1 (203282465-203282845)
               

               
               3-152, gnl|rn3|chr13 (76746994-76746610)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-152, gnl|bosTau2|chr16 (41889669-41889520)
               

               
               3-152, gnl|canFam2|chr7 (28504249-28503871)
               

               
               3-152, gnl|dasNov1|scaffold_67187 (3684-4053)
               

               
               3-152, gnl|echTel1|scaffold_314472 (6638-7014)
               

               
               3-152, gnl|hg17|chr1 (170336295-170336675)
               

               
               3-152, gnl|Hg17|chr1 (170336382-170336531)
               

               
               3-152, gnl|loxAfr1|scaffold_23994 (23766-24146)
               

               
               3-152, gnl|mm7|chr1 (161121591-161121197)
               

               
               3-152, gnl|Mm7|chr1 (161121485-161121336)
               

               
               3-152, gnl|monDom2|scaffold_16 (24955126-24955488)
               

               
               3-152, gnl|panTro1|chr1 (152706381-152706761)
               

               
               3-152, gnl|rheMac2|chr1 (203282465-203282845)
               

               
               3-152, gnl|rn3|chr13 (76746994-76746610)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	3-152, gnl\|bosTau2\|chr16 (41889669-41889520)
	3-152, gnl\|canFam2\|chr7 (28504249-28503871)
	3-152, gnl\|dasNov1\|scaffold_67187 (3684-4053)
	3-152, gnl\|echTel1\|scaffold_314472 (6638-7014)
	3-152, gnl\|hg17\|chr1 (170336295-170336675)
	3-152, gnl\|Hg17\|chr1 (170336382-170336531)
	3-152, gnl\|loxAfr1\|scaffold_23994 (23766-24146)
	3-152, gnl\|mm7\|chr1 (161121591-161121197)
	3-152, gnl\|Mm7\|chr1 (161121485-161121336)
	3-152, gnl\|monDom2\|scaffold_16 (24955126-24955488)
	3-152, gnl\|panTro1\|chr1 (152706381-152706761)
	3-152, gnl\|rheMac2\|chr1 (203282465-203282845)
	3-152, gnl\|rn3\|chr13 (76746994-76746610)