Non-Coding RNA Search

rthg05_i6.y1

Sequence:


               
               GTGCCAACATGGAAATACTTAGGTATACATAAAGCAAAATATGTGCATAATCTCTGTGTT
CATCTCTAAAGAacaaaacattgatgaaagaaatcaaagcagacctaaacaaattgagat
gtgtactatgttcatggatgggaagagtcaatattgttaagatctcagttccctccaaac
tgactattgattcagtgccatccaaatcaagatcTCTGCAGGATTTTTTTTGGTAGATGT
AGACAAGCTGATCCTAAAAGTTATATGGAAAGGTAAAAAACTAGAATCTCCAGGAAATTT
TTAAAAGGAAGAACAATCTTGTAGTTCTCTGCTACCTGACCTCTAGGCTTATGATGAAGC
TACAGTGATTAAGACAGTGTGGAAGTGGTGAAAGAAGAGACACCCCACATCCATGGAATG
CACTTTGGAATCCAGAAAGAGACCTGCACATATTAACTGATTTTCCAAAAATGTGCAAAG
GCTATTGAATTTTTCTTTCCAATAAACAGTGCCAGTGAGAATGTGGAGGAACTGGAACAC
TTGTACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCAACATGGAAATACTTAGGTATACATAAAGCAAAATATGTGCATAATCTCTGTGTT
CATCTCTAAAGAacaaaacattgatgaaagaaatcaaagcagacctaaacaaattgagat
gtgtactatgttcatggatgggaagagtcaatattgttaagatctcagttccctccaaac
tgactattgattcagtgccatccaaatcaagatcTCTGCAGGATTTTTTTTGGTAGATGT
AGACAAGCTGATCCTAAAAGTTATATGGAAAGGTAAAAAACTAGAATCTCCAGGAAATTT
TTAAAAGGAAGAACAATCTTGTAGTTCTCTGCTACCTGACCTCTAGGCTTATGATGAAGC
TACAGTGATTAAGACAGTGTGGAAGTGGTGAAAGAAGAGACACCCCACATCCATGGAATG
CACTTTGGAATCCAGAAAGAGACCTGCACATATTAACTGATTTTCCAAAAATGTGCAAAG
GCTATTGAATTTTTCTTTCCAATAAACAGTGCCAGTGAGAATGTGGAGGAACTGGAACAC
TTGTACAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-539, gnl|bosTau2|chr15 (34920417-34919906)
               


               
               7-442, gnl|bosTau2|chr15 (16343585-16343157)
               


               
               13-400, gnl|bosTau2|chr24 (22322736-22323117)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-539, gnl|bosTau2|chr15 (34920417-34919906)
               


               
               7-442, gnl|bosTau2|chr15 (16343585-16343157)
               


               
               13-400, gnl|bosTau2|chr24 (22322736-22323117)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	4-539, gnl\|bosTau2\|chr15 (34920417-34919906)

	7-442, gnl\|bosTau2\|chr15 (16343585-16343157)

	13-400, gnl\|bosTau2\|chr24 (22322736-22323117)