Non-Coding RNA Search

rthg16_n4.y1

Sequence:


               
               GGGATATTTACTTAGTATTGTTTTTATTATGTAGCTGTAACAGATGACAAATGTAACTTC
AGGTAATAGGAAGCAAAATGACAGCTACATCCCTGGATGGTCAAAGTTGTGAAACTGAGA
AGTTATAGAATTCTTCAGCTCTTTCCATTTGCACTTATACTTTCAAGATTCTGTTTCTGG
CTAGGTCTGCATGCTCCCCGTGATGAGGTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGATATTTACTTAGTATTGTTTTTATTATGTAGCTGTAACAGATGACAAATGTAACTTC
AGGTAATAGGAAGCAAAATGACAGCTACATCCCTGGATGGTCAAAGTTGTGAAACTGAGA
AGTTATAGAATTCTTCAGCTCTTTCCATTTGCACTTATACTTTCAAGATTCTGTTTCTGG
CTAGGTCTGCATGCTCCCCGTGATGAGGTCA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-211, gnl|bosTau2|chr16 (28315990-28316202)
               

               
               1-211, gnl|canFam2|chr7 (29786637-29786426)
               

               
               1-211, gnl|echTel1|scaffold_320562 (117944-117749)
               

               
               1-211, gnl|hg17|chr1 (168836978-168837194)
               

               
               1-211, gnl|Hg17|chr1 (168837012-168837231)
               

               
               1-211, gnl|mm7|chr1 (162187172-162186945)
               

               
               1-211, gnl|Mm7|chr1 (162187136-162186914)
               

               
               1-211, gnl|monDom2|scaffold_16 (23239405-23239640)
               

               
               1-211, gnl|oryCun1|scaffold_201478 (34295-34511)
               

               
               1-211, gnl|panTro1|chr1 (151164658-151164874)
               

               
               1-211, gnl|rheMac2|chr1 (201830424-201830640)
               

               
               1-211, gnl|rn3|chr13 (77932920-77932693)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-211, gnl|bosTau2|chr16 (28315990-28316202)
               

               
               1-211, gnl|canFam2|chr7 (29786637-29786426)
               

               
               1-211, gnl|echTel1|scaffold_320562 (117944-117749)
               

               
               1-211, gnl|hg17|chr1 (168836978-168837194)
               

               
               1-211, gnl|Hg17|chr1 (168837012-168837231)
               

               
               1-211, gnl|mm7|chr1 (162187172-162186945)
               

               
               1-211, gnl|Mm7|chr1 (162187136-162186914)
               

               
               1-211, gnl|monDom2|scaffold_16 (23239405-23239640)
               

               
               1-211, gnl|oryCun1|scaffold_201478 (34295-34511)
               

               
               1-211, gnl|panTro1|chr1 (151164658-151164874)
               

               
               1-211, gnl|rheMac2|chr1 (201830424-201830640)
               

               
               1-211, gnl|rn3|chr13 (77932920-77932693)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	1-211, gnl\|bosTau2\|chr16 (28315990-28316202)
	1-211, gnl\|canFam2\|chr7 (29786637-29786426)
	1-211, gnl\|echTel1\|scaffold_320562 (117944-117749)
	1-211, gnl\|hg17\|chr1 (168836978-168837194)
	1-211, gnl\|Hg17\|chr1 (168837012-168837231)
	1-211, gnl\|mm7\|chr1 (162187172-162186945)
	1-211, gnl\|Mm7\|chr1 (162187136-162186914)
	1-211, gnl\|monDom2\|scaffold_16 (23239405-23239640)
	1-211, gnl\|oryCun1\|scaffold_201478 (34295-34511)
	1-211, gnl\|panTro1\|chr1 (151164658-151164874)
	1-211, gnl\|rheMac2\|chr1 (201830424-201830640)
	1-211, gnl\|rn3\|chr13 (77932920-77932693)