Non-Coding RNA Search

rthg17_l2.y1

Sequence:


               
               CAAACAAAGCCACATTTCCTTTAAATAAATTTTTAAAAATCCTGGTTGAAGACATGACAA
TGCCATAAGACCCAATCAAATGAAGAAATAAACCCAGCACAACCTTGGACATCACTAGCT
GAATTATCCTCAGCCCCTTTTGTCTGTGGGACAACGCTGCTTACATGTGGAGTGGAGGTG
ATTTACTGCTGAATTAAAACTCAAGTGACACAAGTTACAAGTTGCTATCGTTGAATGAAA
AAACAAAAACAATTCAGGAACAACGGCTAATTTTTTTCTAAAGTTAAATTTAGTGCACTC
TGTCTTAAAAATACGTTTACAGTATTGGATACATACAAGGGTAAAAAAAAATTGTGTGTA
TGTGTGTTGGAGCGATCATTTTTTTTTTCAAAGTTTGCTTAATAGGTTACAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAACAAAGCCACATTTCCTTTAAATAAATTTTTAAAAATCCTGGTTGAAGACATGACAA
TGCCATAAGACCCAATCAAATGAAGAAATAAACCCAGCACAACCTTGGACATCACTAGCT
GAATTATCCTCAGCCCCTTTTGTCTGTGGGACAACGCTGCTTACATGTGGAGTGGAGGTG
ATTTACTGCTGAATTAAAACTCAAGTGACACAAGTTACAAGTTGCTATCGTTGAATGAAA
AAACAAAAACAATTCAGGAACAACGGCTAATTTTTTTCTAAAGTTAAATTTAGTGCACTC
TGTCTTAAAAATACGTTTACAGTATTGGATACATACAAGGGTAAAAAAAAATTGTGTGTA
TGTGTGTTGGAGCGATCATTTTTTTTTTCAAAGTTTGCTTAATAGGTTACAAA

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

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               2-409, gnl|bosTau2|chr21 (43823563-43823164)
               

               
               2-409, gnl|canFam2|chr8 (70658699-70659064)
               

               
               2-409, gnl|danRer3|chr17 (14091752-14092083)
               

               
               2-409, gnl|dasNov1|scaffold_5068 (6392-6740)
               

               
               2-409, gnl|galGal2|chr5 (44591633-44591994)
               

               
               2-409, gnl|hg17|chr14 (98708054-98708416)
               

               
               2-409, gnl|Hg17|chr14 (98708532-98708111)
               

               
               2-409, gnl|loxAfr1|scaffold_10429 (39915-39551)
               

               
               2-409, gnl|mm7|chr12 (105434614-105435006)
               

               
               2-409, gnl|Mm7|chr12 (105435116-105434670)
               

               
               2-409, gnl|monDom2|scaffold_6 (79877459-79877828)
               

               
               2-409, gnl|oryCun1|scaffold_212903 (38808-38474)
               

               
               2-409, gnl|panTro1|chr15 (99205916-99206278)
               

               
               2-409, gnl|rheMac2|chr7 (162430836-162431196)
               

               
               2-409, gnl|rn3|chr6 (132297404-132297783)
               

               
               2-409, gnl|xenTro1|scaffold_588 (296845-297203)

Aligned organism(s): 16 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-409, gnl|bosTau2|chr21 (43823563-43823164)
               

               
               2-409, gnl|canFam2|chr8 (70658699-70659064)
               

               
               2-409, gnl|danRer3|chr17 (14091752-14092083)
               

               
               2-409, gnl|dasNov1|scaffold_5068 (6392-6740)
               

               
               2-409, gnl|galGal2|chr5 (44591633-44591994)
               

               
               2-409, gnl|hg17|chr14 (98708054-98708416)
               

               
               2-409, gnl|Hg17|chr14 (98708532-98708111)
               

               
               2-409, gnl|loxAfr1|scaffold_10429 (39915-39551)
               

               
               2-409, gnl|mm7|chr12 (105434614-105435006)
               

               
               2-409, gnl|Mm7|chr12 (105435116-105434670)
               

               
               2-409, gnl|monDom2|scaffold_6 (79877459-79877828)
               

               
               2-409, gnl|oryCun1|scaffold_212903 (38808-38474)
               

               
               2-409, gnl|panTro1|chr15 (99205916-99206278)
               

               
               2-409, gnl|rheMac2|chr7 (162430836-162431196)
               

               
               2-409, gnl|rn3|chr6 (132297404-132297783)
               

               
               2-409, gnl|xenTro1|scaffold_588 (296845-297203)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               thg (0.126791)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	2-409, gnl\|bosTau2\|chr21 (43823563-43823164)
	2-409, gnl\|canFam2\|chr8 (70658699-70659064)
	2-409, gnl\|danRer3\|chr17 (14091752-14092083)
	2-409, gnl\|dasNov1\|scaffold_5068 (6392-6740)
	2-409, gnl\|galGal2\|chr5 (44591633-44591994)
	2-409, gnl\|hg17\|chr14 (98708054-98708416)
	2-409, gnl\|Hg17\|chr14 (98708532-98708111)
	2-409, gnl\|loxAfr1\|scaffold_10429 (39915-39551)
	2-409, gnl\|mm7\|chr12 (105434614-105435006)
	2-409, gnl\|Mm7\|chr12 (105435116-105434670)
	2-409, gnl\|monDom2\|scaffold_6 (79877459-79877828)
	2-409, gnl\|oryCun1\|scaffold_212903 (38808-38474)
	2-409, gnl\|panTro1\|chr15 (99205916-99206278)
	2-409, gnl\|rheMac2\|chr7 (162430836-162431196)
	2-409, gnl\|rn3\|chr6 (132297404-132297783)
	2-409, gnl\|xenTro1\|scaffold_588 (296845-297203)