Non-Coding RNA Search

rthg18_b9.y1

Sequence:


               
               CACAGATTTTATACTACCCTGTTTTATTCTCTCTACCTTTATTATAAACTCCTTGGGGCG
GTTCATCATAGGGATAACACAAAAGAAGCTGTTCAGTAAAAGACTCACTGATTGTATCAT
TACAAAATTCTTGCACTATCAGAGACCTCAGAGGTTATCTCAGACAGCTTCTCCATTCCG
TAGATTAAGATTCTAAACGGCCCTAGGTCATGTGGTTAGTCCTTTACGAAGTTGGGATCA
TATTTCCTTCCACCCAGCTTAGTTTTTATTGTGCCATCATTTCACCTGTTTATTTCACTT
CAGTTTTGCTCCTTAACTCTGTTCTAAAATCTGACATTTGTTTCATAAAAATGCTGTTAT
TAATAATTACTTTTTTCATGTTACCTATCATCCATATATTCAACAAGTTTGCCTGCTTTG
CATCAGCCTTTGAGCTGGGTATTAGGAATACAGTGATGATGTGTATAACCGGATCATTTG
ACTGTATAGTGAAATTGACAGAACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAGATTTTATACTACCCTGTTTTATTCTCTCTACCTTTATTATAAACTCCTTGGGGCG
GTTCATCATAGGGATAACACAAAAGAAGCTGTTCAGTAAAAGACTCACTGATTGTATCAT
TACAAAATTCTTGCACTATCAGAGACCTCAGAGGTTATCTCAGACAGCTTCTCCATTCCG
TAGATTAAGATTCTAAACGGCCCTAGGTCATGTGGTTAGTCCTTTACGAAGTTGGGATCA
TATTTCCTTCCACCCAGCTTAGTTTTTATTGTGCCATCATTTCACCTGTTTATTTCACTT
CAGTTTTGCTCCTTAACTCTGTTCTAAAATCTGACATTTGTTTCATAAAAATGCTGTTAT
TAATAATTACTTTTTTCATGTTACCTATCATCCATATATTCAACAAGTTTGCCTGCTTTG
CATCAGCCTTTGAGCTGGGTATTAGGAATACAGTGATGATGTGTATAACCGGATCATTTG
ACTGTATAGTGAAATTGACAGAACAT

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-192, gnl|bosTau2|chr15 (8020872-8021064)
               

               
               1-192, gnl|Hg17|chr11 (111607160-111607350)
               


               
               200-459, gnl|bosTau2|chr15 (8021097-8021361)
               

               
               200-459, gnl|Hg17|chr11 (111607378-111607607)
               

               
               200-459, gnl|Mm7|chr9 (50502583-50502315)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-192, gnl|bosTau2|chr15 (8020872-8021064)
               

               
               1-192, gnl|Hg17|chr11 (111607160-111607350)
               


               
               200-459, gnl|bosTau2|chr15 (8021097-8021361)
               

               
               200-459, gnl|Hg17|chr11 (111607378-111607607)
               

               
               200-459, gnl|Mm7|chr9 (50502583-50502315)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	1-192, gnl\|bosTau2\|chr15 (8020872-8021064)
	1-192, gnl\|Hg17\|chr11 (111607160-111607350)

	200-459, gnl\|bosTau2\|chr15 (8021097-8021361)
	200-459, gnl\|Hg17\|chr11 (111607378-111607607)
	200-459, gnl\|Mm7\|chr9 (50502583-50502315)