Non-Coding RNA Search

rthg25_d3.y1

Sequence:


               
               GTTTTTTTTTTTTTTTTTTGAGAGGATGGTACTCATAAAATGAAGATCGCTCTGTCACAG
GAAATGTATTTATAGGAACTGTTTTAAGGAGCTTATTAAAAACAAATCTGGTGATGTGTA
TCTCTATTGATTCAAACACTAGAAAGAGGCAAATGGTACATACATTATAGTTAGAAAAAA
TAGCCATTTGGAACACCAGCAGAAAGCTTGTGAAACCACGGATGCTTACCAGTTCTTCAT
TTTAGCTTTAAGAAACACACAGCAAAGTCCAGTCGTATGTGTTCCTTGGATGGAGCCGAT
TCTATACCATTTTTTAAAAACGCCTTCATGCATACACTGGAGAAGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTTTTTTTTTTTTTTGAGAGGATGGTACTCATAAAATGAAGATCGCTCTGTCACAG
GAAATGTATTTATAGGAACTGTTTTAAGGAGCTTATTAAAAACAAATCTGGTGATGTGTA
TCTCTATTGATTCAAACACTAGAAAGAGGCAAATGGTACATACATTATAGTTAGAAAAAA
TAGCCATTTGGAACACCAGCAGAAAGCTTGTGAAACCACGGATGCTTACCAGTTCTTCAT
TTTAGCTTTAAGAAACACACAGCAAAGTCCAGTCGTATGTGTTCCTTGGATGGAGCCGAT
TCTATACCATTTTTTAAAAACGCCTTCATGCATACACTGGAGAAGCAG

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               4-348, gnl|bosTau2|chr24 (34936796-34937138)
               

               
               4-348, gnl|canFam2|chr1 (23332273-23331451)
               

               
               4-348, gnl|echTel1|scaffold_301160 (96883-97743)
               

               
               4-348, gnl|hg17|chr18 (51137417-51138244)
               

               
               4-348, gnl|Hg17|chr18 (51137922-51137579)
               

               
               4-348, gnl|loxAfr1|scaffold_8870 (66081-66905)
               

               
               4-348, gnl|mm7|chr18 (69988253-69987390)
               

               
               4-348, gnl|Mm7|chr18 (69987755-69988092)
               

               
               4-348, gnl|monDom2|scaffold_20 (47930667-47929857)
               

               
               4-348, gnl|oryCun1|scaffold_202185 (57402-56586)
               

               
               4-348, gnl|panTro1|chr17 (47766797-47767624)
               

               
               4-348, gnl|rheMac2|chr18 (48593109-48593937)
               

               
               4-348, gnl|rn3|chr18 (66345401-66344527)
               

               
               4-348, gnl|xenTro1|scaffold_431 (994352-993508)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-348, gnl|bosTau2|chr24 (34936796-34937138)
               

               
               4-348, gnl|canFam2|chr1 (23332273-23331451)
               

               
               4-348, gnl|echTel1|scaffold_301160 (96883-97743)
               

               
               4-348, gnl|hg17|chr18 (51137417-51138244)
               

               
               4-348, gnl|Hg17|chr18 (51137922-51137579)
               

               
               4-348, gnl|loxAfr1|scaffold_8870 (66081-66905)
               

               
               4-348, gnl|mm7|chr18 (69988253-69987390)
               

               
               4-348, gnl|Mm7|chr18 (69987755-69988092)
               

               
               4-348, gnl|monDom2|scaffold_20 (47930667-47929857)
               

               
               4-348, gnl|oryCun1|scaffold_202185 (57402-56586)
               

               
               4-348, gnl|panTro1|chr17 (47766797-47767624)
               

               
               4-348, gnl|rheMac2|chr18 (48593109-48593937)
               

               
               4-348, gnl|rn3|chr18 (66345401-66344527)
               

               
               4-348, gnl|xenTro1|scaffold_431 (994352-993508)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               thg (0.126791)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	4-348, gnl\|bosTau2\|chr24 (34936796-34937138)
	4-348, gnl\|canFam2\|chr1 (23332273-23331451)
	4-348, gnl\|echTel1\|scaffold_301160 (96883-97743)
	4-348, gnl\|hg17\|chr18 (51137417-51138244)
	4-348, gnl\|Hg17\|chr18 (51137922-51137579)
	4-348, gnl\|loxAfr1\|scaffold_8870 (66081-66905)
	4-348, gnl\|mm7\|chr18 (69988253-69987390)
	4-348, gnl\|Mm7\|chr18 (69987755-69988092)
	4-348, gnl\|monDom2\|scaffold_20 (47930667-47929857)
	4-348, gnl\|oryCun1\|scaffold_202185 (57402-56586)
	4-348, gnl\|panTro1\|chr17 (47766797-47767624)
	4-348, gnl\|rheMac2\|chr18 (48593109-48593937)
	4-348, gnl\|rn3\|chr18 (66345401-66344527)
	4-348, gnl\|xenTro1\|scaffold_431 (994352-993508)