Non-Coding RNA Search

rthg25_p12.y1

Sequence:


               
               GAAGGGGCAGGTAGGGTGTTGGCTAAGAGACCAGGAGTTTAGTTTGTGGGTATTTTAAAA
AGGGTAAAGTATCCCTTGAGATACTCAAGTAGAAGTGGCAAGTAATGATTAGATAATTGA
GTCTGTAATCATGGGAGAGGTTCTAAGCTTGATAAATAAATATGGCAGGCATCCCAATGT
AGCCAGTATTTAAAAACCCGAGACTGGACGAGATCACAGAGAGAATGAATATAGATGGAA
AAGAAAAGGAAACCCCACAACCAGGCCCTAGGGAGCTCCAGAAAAAAGAGTTAGCGTTGG
AGACTTTCTATTTTCAGGTATGATATAGTAGGGCATGGCAGGCCAACAAGAGGACAAAAA
TAAATAAGTAAATATATATATATATGACAAATTGCGAAGAAAAATAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGGGGCAGGTAGGGTGTTGGCTAAGAGACCAGGAGTTTAGTTTGTGGGTATTTTAAAA
AGGGTAAAGTATCCCTTGAGATACTCAAGTAGAAGTGGCAAGTAATGATTAGATAATTGA
GTCTGTAATCATGGGAGAGGTTCTAAGCTTGATAAATAAATATGGCAGGCATCCCAATGT
AGCCAGTATTTAAAAACCCGAGACTGGACGAGATCACAGAGAGAATGAATATAGATGGAA
AAGAAAAGGAAACCCCACAACCAGGCCCTAGGGAGCTCCAGAAAAAAGAGTTAGCGTTGG
AGACTTTCTATTTTCAGGTATGATATAGTAGGGCATGGCAGGCCAACAAGAGGACAAAAA
TAAATAAGTAAATATATATATATATGACAAATTGCGAAGAAAAATAGTT

Aligned organism(s): 7 entry(ies)

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Aligned organism(s): 7 entry(ies)

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               151-348, gnl|bosTau2|chr13 (51705421-51705229)
               

               
               151-348, gnl|canFam2|chr24 (32478691-32478875)
               

               
               151-348, gnl|dasNov1|scaffold_258227 (508-315)
               

               
               151-348, gnl|hg17|chr20 (39567692-39567829)
               

               
               151-348, gnl|loxAfr1|scaffold_47112 (5853-5634)
               

               
               151-348, gnl|panTro1|chr21 (42007856-42007993)
               

               
               151-348, gnl|rheMac2|chr10 (22948620-22948487)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               151-348, gnl|bosTau2|chr13 (51705421-51705229)
               

               
               151-348, gnl|canFam2|chr24 (32478691-32478875)
               

               
               151-348, gnl|dasNov1|scaffold_258227 (508-315)
               

               
               151-348, gnl|hg17|chr20 (39567692-39567829)
               

               
               151-348, gnl|loxAfr1|scaffold_47112 (5853-5634)
               

               
               151-348, gnl|panTro1|chr21 (42007856-42007993)
               

               
               151-348, gnl|rheMac2|chr10 (22948620-22948487)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	151-348, gnl\|bosTau2\|chr13 (51705421-51705229)
	151-348, gnl\|canFam2\|chr24 (32478691-32478875)
	151-348, gnl\|dasNov1\|scaffold_258227 (508-315)
	151-348, gnl\|hg17\|chr20 (39567692-39567829)
	151-348, gnl\|loxAfr1\|scaffold_47112 (5853-5634)
	151-348, gnl\|panTro1\|chr21 (42007856-42007993)
	151-348, gnl\|rheMac2\|chr10 (22948620-22948487)