Non-Coding RNA Search

rthg29_h21.y1

Sequence:


               
               GTCCTGCCTGTTGAAGATGATGATTGGACCCCATAAGTGCCTGTTGCTTAATGCCCTCCT
GTGACAGATTGGCTTATGGAACGTGCTGGTTTCTTTCCTGTTCCTGTAACACTATCTCTG
TTTTCTTTGCAGGACAATTAAGATCGTGTCTACTGGGCTTCCTCAAATTAATGAGATGCT
CCCTTTACTCCCTTGATTAGAGACGAATCTCTCCCTGGACAACGATTCTGTGGGCAGATG
AAAGAGGCCATGAGCAAGGAAATTTCATGCCGTTGTGAGAGATGTAGTCTAATTGGTGGA
AATCACTTTGGAATCTACTTGCCTTCTTAGAACAAAGACCAGACTTGGCGCTTCATGAAG
AAAAATGTGTTTTCAGACAGGCGTCGATGTGTATCCAGCTCTGCCTGGATAGTGCAAAGC
ACCAATGCAACAGGTAGACAAGCTTGTTTCTAGGATCTAAAGCATCATGAAGGTGGACCC
AGAGAGAGAGCGACGCCATAAACAGACTAACTACAAGTCTTTGTAGATAGGTTCATTTGC
GCTGTATGTTAGATTCCACAACAGCAACAGACTCGAAGGCATAGAGAACAGACTTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCTGCCTGTTGAAGATGATGATTGGACCCCATAAGTGCCTGTTGCTTAATGCCCTCCT
GTGACAGATTGGCTTATGGAACGTGCTGGTTTCTTTCCTGTTCCTGTAACACTATCTCTG
TTTTCTTTGCAGGACAATTAAGATCGTGTCTACTGGGCTTCCTCAAATTAATGAGATGCT
CCCTTTACTCCCTTGATTAGAGACGAATCTCTCCCTGGACAACGATTCTGTGGGCAGATG
AAAGAGGCCATGAGCAAGGAAATTTCATGCCGTTGTGAGAGATGTAGTCTAATTGGTGGA
AATCACTTTGGAATCTACTTGCCTTCTTAGAACAAAGACCAGACTTGGCGCTTCATGAAG
AAAAATGTGTTTTCAGACAGGCGTCGATGTGTATCCAGCTCTGCCTGGATAGTGCAAAGC
ACCAATGCAACAGGTAGACAAGCTTGTTTCTAGGATCTAAAGCATCATGAAGGTGGACCC
AGAGAGAGAGCGACGCCATAAACAGACTAACTACAAGTCTTTGTAGATAGGTTCATTTGC
GCTGTATGTTAGATTCCACAACAGCAACAGACTCGAAGGCATAGAGAACAGACTTGTGG

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               2-246, gnl|bosTau2|chr13 (6950937-6951181)
               

               
               2-246, gnl|canFam2|chr2 (30788902-30788451)
               

               
               2-246, gnl|dasNov1|scaffold_55755 (1805-2281)
               

               
               2-246, gnl|hg17|chr10 (8297312-8297778)
               

               
               2-246, gnl|Hg17|chr10 (8297322-8297574)
               

               
               2-246, gnl|loxAfr1|scaffold_200 (92642-92205)
               

               
               2-246, gnl|monDom2|scaffold_30 (4976914-4977384)
               

               
               2-246, gnl|oryCun1|scaffold_205174 (20318-20755)
               

               
               2-246, gnl|panTro1|chr8 (8399466-8399933)
               

               
               2-246, gnl|rheMac2|chr9 (8421080-8421551)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-246, gnl|bosTau2|chr13 (6950937-6951181)
               

               
               2-246, gnl|canFam2|chr2 (30788902-30788451)
               

               
               2-246, gnl|dasNov1|scaffold_55755 (1805-2281)
               

               
               2-246, gnl|hg17|chr10 (8297312-8297778)
               

               
               2-246, gnl|Hg17|chr10 (8297322-8297574)
               

               
               2-246, gnl|loxAfr1|scaffold_200 (92642-92205)
               

               
               2-246, gnl|monDom2|scaffold_30 (4976914-4977384)
               

               
               2-246, gnl|oryCun1|scaffold_205174 (20318-20755)
               

               
               2-246, gnl|panTro1|chr8 (8399466-8399933)
               

               
               2-246, gnl|rheMac2|chr9 (8421080-8421551)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	2-246, gnl\|bosTau2\|chr13 (6950937-6951181)
	2-246, gnl\|canFam2\|chr2 (30788902-30788451)
	2-246, gnl\|dasNov1\|scaffold_55755 (1805-2281)
	2-246, gnl\|hg17\|chr10 (8297312-8297778)
	2-246, gnl\|Hg17\|chr10 (8297322-8297574)
	2-246, gnl\|loxAfr1\|scaffold_200 (92642-92205)
	2-246, gnl\|monDom2\|scaffold_30 (4976914-4977384)
	2-246, gnl\|oryCun1\|scaffold_205174 (20318-20755)
	2-246, gnl\|panTro1\|chr8 (8399466-8399933)
	2-246, gnl\|rheMac2\|chr9 (8421080-8421551)