Non-Coding RNA Search

rthg31_h21.y1

Sequence:


               
               GCCCAGGCGAGTATATGAGAACCACTTCCTCTTACACAATGTATCTGTTTGTGAAAACTT
AGGGAGAAATTTACTTTCTGTAAATGTACCTCAGTACATATATTATCCTGAAATATATAC
ATACATTGAAATGTTGGACATCCACCATGGAGAGTATTTTGACTCTTAGATGCTTTGGGG
TCTGAAGATAAAGCTCACAAGTGAAACATTCATTCATTCACTCAGTCAACATTTAAAGAG
TAGTGCTGggagttcccgtcatggcacagtggttaacaaatacgactaggaaccatgagg
ttgcgggttcggtccctgcccttgctcagtgggttaacgatccggcattgccatgagctg
tggtgtaggttgcagacacagctcggatcccgcgttgttgtggctctggcataggccagt
ggcagcagctctgattcgacccctagcatgggaacctccatatgccgcgggagcggccca
agaaatggcaaaaagacCTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCAGGCGAGTATATGAGAACCACTTCCTCTTACACAATGTATCTGTTTGTGAAAACTT
AGGGAGAAATTTACTTTCTGTAAATGTACCTCAGTACATATATTATCCTGAAATATATAC
ATACATTGAAATGTTGGACATCCACCATGGAGAGTATTTTGACTCTTAGATGCTTTGGGG
TCTGAAGATAAAGCTCACAAGTGAAACATTCATTCATTCACTCAGTCAACATTTAAAGAG
TAGTGCTGggagttcccgtcatggcacagtggttaacaaatacgactaggaaccatgagg
ttgcgggttcggtccctgcccttgctcagtgggttaacgatccggcattgccatgagctg
tggtgtaggttgcagacacagctcggatcccgcgttgttgtggctctggcataggccagt
ggcagcagctctgattcgacccctagcatgggaacctccatatgccgcgggagcggccca
agaaatggcaaaaagacCTAAAAAAAAAAAAAAAAAA

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               101-246, gnl|bosTau2|chr9 (19768954-19769099)
               

               
               101-246, gnl|canFam2|chr12 (71248947-71249153)
               

               
               101-246, gnl|hg17|chr6 (112196104-112196317)
               

               
               101-246, gnl|Hg17|chr6 (112196311-112196188)
               

               
               101-246, gnl|loxAfr1|scaffold_11156 (42278-42071)
               

               
               101-246, gnl|mm7|chr10 (39245203-39245061)
               

               
               101-246, gnl|panTro1|chr5 (114538016-114538229)
               

               
               101-246, gnl|rheMac2|chr4 (152168376-152168162)
               

               
               101-246, gnl|rn3|chr20 (43620678-43620514)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               101-246, gnl|bosTau2|chr9 (19768954-19769099)
               

               
               101-246, gnl|canFam2|chr12 (71248947-71249153)
               

               
               101-246, gnl|hg17|chr6 (112196104-112196317)
               

               
               101-246, gnl|Hg17|chr6 (112196311-112196188)
               

               
               101-246, gnl|loxAfr1|scaffold_11156 (42278-42071)
               

               
               101-246, gnl|mm7|chr10 (39245203-39245061)
               

               
               101-246, gnl|panTro1|chr5 (114538016-114538229)
               

               
               101-246, gnl|rheMac2|chr4 (152168376-152168162)
               

               
               101-246, gnl|rn3|chr20 (43620678-43620514)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	101-246, gnl\|bosTau2\|chr9 (19768954-19769099)
	101-246, gnl\|canFam2\|chr12 (71248947-71249153)
	101-246, gnl\|hg17\|chr6 (112196104-112196317)
	101-246, gnl\|Hg17\|chr6 (112196311-112196188)
	101-246, gnl\|loxAfr1\|scaffold_11156 (42278-42071)
	101-246, gnl\|mm7\|chr10 (39245203-39245061)
	101-246, gnl\|panTro1\|chr5 (114538016-114538229)
	101-246, gnl\|rheMac2\|chr4 (152168376-152168162)
	101-246, gnl\|rn3\|chr20 (43620678-43620514)