Non-Coding RNA Search

rthg32_m4.y1

Sequence:


               
               TGGTCTGTCAGGCATGTACGTGACATGCATTTGCCCCATTAATTAAGGAAGTGTCACAGT
CTCTGAGATTCAGAGAGTGGAACCAAGAAGACCCCCTTCTACCCTTGGCCATTGCCTTTG
GTAAAGAGACAAGTGCCTGTATTTATGGATACATTCCTAGTGACGACAGTTGCTTGCACT
AAGTGCATATTCTCTTCCAGCTGCTGTTTATAGACTGACTGCTGTCTTGATAGCTCAGGT
ATACTAAGTGTTTTGGGTTTATTTTCCAGTTCAGATATCAATTTTGAAGTGCAAAACCAT
TTTTATTTCTGTTAGAATCAAGTGCATTGAGATGTTGTTTTAGGAATTGAAATAATGTAA
TTATATAATGTGATATAAAATACAAAAGATATTTAAAAATGACTTTTTCCTCCTCACTTA
TTAAATTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTCTGTCAGGCATGTACGTGACATGCATTTGCCCCATTAATTAAGGAAGTGTCACAGT
CTCTGAGATTCAGAGAGTGGAACCAAGAAGACCCCCTTCTACCCTTGGCCATTGCCTTTG
GTAAAGAGACAAGTGCCTGTATTTATGGATACATTCCTAGTGACGACAGTTGCTTGCACT
AAGTGCATATTCTCTTCCAGCTGCTGTTTATAGACTGACTGCTGTCTTGATAGCTCAGGT
ATACTAAGTGTTTTGGGTTTATTTTCCAGTTCAGATATCAATTTTGAAGTGCAAAACCAT
TTTTATTTCTGTTAGAATCAAGTGCATTGAGATGTTGTTTTAGGAATTGAAATAATGTAA
TTATATAATGTGATATAAAATACAAAAGATATTTAAAAATGACTTTTTCCTCCTCACTTA
TTAAATTTTT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               120-275, gnl|bosTau2|chr9 (43265991-43266149)
               

               
               120-275, gnl|canFam2|chr1 (30811794-30812077)
               

               
               120-275, gnl|dasNov1|scaffold_1538 (88808-89079)
               

               
               120-275, gnl|echTel1|scaffold_246342 (4501-4244)
               

               
               120-275, gnl|hg17|chr6 (135395955-135396238)
               

               
               120-275, gnl|Hg17|chr6 (135396214-135396052)
               

               
               120-275, gnl|mm7|chr10 (21038901-21038660)
               

               
               120-275, gnl|monDom2|scaffold_0 (75691658-75691405)
               

               
               120-275, gnl|panTro1|chr5 (138176941-138177224)
               

               
               120-275, gnl|rheMac2|chr4 (128813223-128812943)
               

               
               120-275, gnl|rn3|chr1 (16676178-16675932)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               120-275, gnl|bosTau2|chr9 (43265991-43266149)
               

               
               120-275, gnl|canFam2|chr1 (30811794-30812077)
               

               
               120-275, gnl|dasNov1|scaffold_1538 (88808-89079)
               

               
               120-275, gnl|echTel1|scaffold_246342 (4501-4244)
               

               
               120-275, gnl|hg17|chr6 (135395955-135396238)
               

               
               120-275, gnl|Hg17|chr6 (135396214-135396052)
               

               
               120-275, gnl|mm7|chr10 (21038901-21038660)
               

               
               120-275, gnl|monDom2|scaffold_0 (75691658-75691405)
               

               
               120-275, gnl|panTro1|chr5 (138176941-138177224)
               

               
               120-275, gnl|rheMac2|chr4 (128813223-128812943)
               

               
               120-275, gnl|rn3|chr1 (16676178-16675932)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	120-275, gnl\|bosTau2\|chr9 (43265991-43266149)
	120-275, gnl\|canFam2\|chr1 (30811794-30812077)
	120-275, gnl\|dasNov1\|scaffold_1538 (88808-89079)
	120-275, gnl\|echTel1\|scaffold_246342 (4501-4244)
	120-275, gnl\|hg17\|chr6 (135395955-135396238)
	120-275, gnl\|Hg17\|chr6 (135396214-135396052)
	120-275, gnl\|mm7\|chr10 (21038901-21038660)
	120-275, gnl\|monDom2\|scaffold_0 (75691658-75691405)
	120-275, gnl\|panTro1\|chr5 (138176941-138177224)
	120-275, gnl\|rheMac2\|chr4 (128813223-128812943)
	120-275, gnl\|rn3\|chr1 (16676178-16675932)