rthg34_a21.y1
|
GCTacctgagccactgcagtgacaccaccagatccttaacccactctgccacaaggaaac
tccTAATGCTGCCCATTTTAAAATACAGTGATGGAATTTTTTTATTTAATAGATGGTGAA
TTTGAATTTGAATGTTAGTCAGTATGCTTAAATGAACATTGAAATAGTATTGACTTTCAG
AAAAATGGGGAAACGATTTGTTCTCATTTGTGCTTTTACTCATGAAGTCAGCAATTACTT
CTTGAGTAGTTTCTATTCATTGAAAATACTAAACTTTGCTGGAAATTTTCAGGTATTTAG
TGGACTACTGCAGAAATAAATGCTGAGCCAGCTACATCTTCaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaa
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTacctgagccactgcagtgacaccaccagatccttaacccactctgccacaaggaaac
tccTAATGCTGCCCATTTTAAAATACAGTGATGGAATTTTTTTATTTAATAGATGGTGAA
TTTGAATTTGAATGTTAGTCAGTATGCTTAAATGAACATTGAAATAGTATTGACTTTCAG
AAAAATGGGGAAACGATTTGTTCTCATTTGTGCTTTTACTCATGAAGTCAGCAATTACTT
CTTGAGTAGTTTCTATTCATTGAAAATACTAAACTTTGCTGGAAATTTTCAGGTATTTAG
TGGACTACTGCAGAAATAAATGCTGAGCCAGCTACATCTTCaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaa
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
167-247, + strand, RNAmicro p=0.99507 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
167-247, + strand, RNAmicro p=0.99507 |
|
79-341, gnl|bosTau2|chr10 (35261889-35261635) |
|
79-341, gnl|canFam2|chr30 (25341784-25342049) |
|
79-341, gnl|dasNov1|scaffold_69093 (1600-1355) |
|
79-341, gnl|echTel1|scaffold_297367 (2355-2096) |
|
79-341, gnl|hg17|chr15 (55239224-55239467) |
|
79-341, gnl|Hg17|chr15 (55239223-55239470) |
|
79-341, gnl|loxAfr1|scaffold_35943 (10977-10725) |
|
79-341, gnl|mm7|chr9 (71984627-71984406) |
|
79-341, gnl|monDom2|scaffold_12 (34880933-34881181) |
|
79-341, gnl|panTro1|chr16 (55587160-55587403) |
|
79-341, gnl|rheMac2|chr7 (35483577-35483824) |
|
79-341, gnl|rn3|chr8 (76445442-76445218) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
79-341, gnl|bosTau2|chr10 (35261889-35261635) |
|
79-341, gnl|canFam2|chr30 (25341784-25342049) |
|
79-341, gnl|dasNov1|scaffold_69093 (1600-1355) |
|
79-341, gnl|echTel1|scaffold_297367 (2355-2096) |
|
79-341, gnl|hg17|chr15 (55239224-55239467) |
|
79-341, gnl|Hg17|chr15 (55239223-55239470) |
|
79-341, gnl|loxAfr1|scaffold_35943 (10977-10725) |
|
79-341, gnl|mm7|chr9 (71984627-71984406) |
|
79-341, gnl|monDom2|scaffold_12 (34880933-34881181) |
|
79-341, gnl|panTro1|chr16 (55587160-55587403) |
|
79-341, gnl|rheMac2|chr7 (35483577-35483824) |
|
79-341, gnl|rn3|chr8 (76445442-76445218) |
