rton1201b_g15.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTTTTCTTCGAAGTTTAGGAATGATGATGCTTTGGAAGAAGCCAAGGCAGACTTTTCT GGAATGTCAGTGAGGAAGAACGTGCCCGTGTCCAAGGTCATGCACAAGTGCTTTGTAGAG GTCAATGAAGAGGGCACCGAGGCAGCCGCGGCCACAGCTGTGGTTAGGAACTCCCGGTGC AGCAGAATTGAACCAAGATTTTGTGCAGATCACCCTTTTCTTTTCTTCATCAGGCACCTT GAAACCAACAGCATTTGGTTCTGTGGCAGATTCTCTTCTCCATAAAGAGGTGCAATTGCT GTTCATGCACTCTTTTCGCTTCTGACCACCTGCTTGGCTTTAAATTCCCTGGGACGAAAT TAGTGCTATGGTTGGAATGCCAAAATAAAGTGTGATTATGATCATAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTTTTCTTCGAAGTTTAGGAATGATGATGCTTTGGAAGAAGCCAAGGCAGACTTTTCT GGAATGTCAGTGAGGAAGAACGTGCCCGTGTCCAAGGTCATGCACAAGTGCTTTGTAGAG GTCAATGAAGAGGGCACCGAGGCAGCCGCGGCCACAGCTGTGGTTAGGAACTCCCGGTGC AGCAGAATTGAACCAAGATTTTGTGCAGATCACCCTTTTCTTTTCTTCATCAGGCACCTT GAAACCAACAGCATTTGGTTCTGTGGCAGATTCTCTTCTCCATAAAGAGGTGCAATTGCT GTTCATGCACTCTTTTCGCTTCTGACCACCTGCTTGGCTTTAAATTCCCTGGGACGAAAT TAGTGCTATGGTTGGAATGCCAAAATAAAGTGTGATTATGATCATAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 1-400, gnl|bosTau2|chr4 (40280611-40280213) | |
| 1-400, gnl|canFam2|chr1 (16218208-16217776) | |
| 1-400, gnl|canFam2|chr1 (16218222-16217783) | |
| 1-400, gnl|danRer3|chr16 (52452270-52451847) | |
| 1-400, gnl|danRer3|chr16 (52474981-52474555) | |
| 1-400, gnl|dasNov1|scaffold_82644 (2554-2986) | |
| 1-400, gnl|dasNov1|scaffold_82644 (2540-2979) | |
| 1-400, gnl|echTel1|scaffold_301016 (149851-150264) | |
| 1-400, gnl|echTel1|scaffold_43911 (953-1373) | |
| 1-400, gnl|fr1|chrUn (46731038-46730626) | |
| 1-400, gnl|fr1|chrUn (46731046-46730630) | |
| 1-400, gnl|galGal2|chr2 (67392457-67392031) | |
| 1-400, gnl|hg17|chr18 (59805073-59805505) | |
| 1-400, gnl|Hg17|chr18 (59805207-59805601) | |
| 1-400, gnl|hg17|chr6 (2994040-2994474) | |
| 1-400, gnl|loxAfr1|scaffold_26259 (42756-42324) | |
| 1-400, gnl|loxAfr1|scaffold_26259 (42770-42331) | |
| 1-400, gnl|mm7|chr1 (107506884-107507304) | |
| 1-400, gnl|mm7|chr1 (107506870-107507306) | |
| 1-400, gnl|monDom2|scaffold_4 (68254487-68254916) | |
| 1-400, gnl|monDom2|scaffold_4 (68254475-68254906) | |
| 1-400, gnl|oryCun1|scaffold_80936 (1017-585) | |
| 1-400, gnl|oryCun1|scaffold_80936 (1032-595) | |
| 1-400, gnl|panTro1|chr17 (56657089-56657521) | |
| 1-400, gnl|panTro1|chr5 (3009700-3010120) | |
| 1-400, gnl|rheMac2|chr18 (57395472-57395904) | |
| 1-400, gnl|rheMac2|chr18 (57395458-57395897) | |
| 1-400, gnl|rn3|chr13 (13714056-13714476) | |
| 1-400, gnl|rn3|chr13 (13714042-13714471) | |
| 1-400, gnl|tetNig1|chrUn_random (45305238-45304829) | |
| 1-400, gnl|tetNig1|chrUn_random (45305240-45304830) | |
| 1-400, gnl|xenTro1|scaffold_78 (746747-746328) | |
| 1-400, gnl|xenTro1|scaffold_78 (742515-742091) | |
| 6-292, gnl|bosTau2|chr23 (31699423-31699135) | |
| 6-292, gnl|Hg17|chr6 (2893809-2893524) | |
| 6-292, gnl|Mm7|chr13 (33335854-33335573) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-400, gnl|bosTau2|chr4 (40280611-40280213) | |
| 1-400, gnl|canFam2|chr1 (16218208-16217776) | |
| 1-400, gnl|canFam2|chr1 (16218222-16217783) | |
| 1-400, gnl|danRer3|chr16 (52452270-52451847) | |
| 1-400, gnl|danRer3|chr16 (52474981-52474555) | |
| 1-400, gnl|dasNov1|scaffold_82644 (2554-2986) | |
| 1-400, gnl|dasNov1|scaffold_82644 (2540-2979) | |
| 1-400, gnl|echTel1|scaffold_301016 (149851-150264) | |
| 1-400, gnl|echTel1|scaffold_43911 (953-1373) | |
| 1-400, gnl|fr1|chrUn (46731038-46730626) | |
| 1-400, gnl|fr1|chrUn (46731046-46730630) | |
| 1-400, gnl|galGal2|chr2 (67392457-67392031) | |
| 1-400, gnl|hg17|chr18 (59805073-59805505) | |
| 1-400, gnl|Hg17|chr18 (59805207-59805601) | |
| 1-400, gnl|hg17|chr6 (2994040-2994474) | |
| 1-400, gnl|loxAfr1|scaffold_26259 (42756-42324) | |
| 1-400, gnl|loxAfr1|scaffold_26259 (42770-42331) | |
| 1-400, gnl|mm7|chr1 (107506884-107507304) | |
| 1-400, gnl|mm7|chr1 (107506870-107507306) | |
| 1-400, gnl|monDom2|scaffold_4 (68254487-68254916) | |
| 1-400, gnl|monDom2|scaffold_4 (68254475-68254906) | |
| 1-400, gnl|oryCun1|scaffold_80936 (1017-585) | |
| 1-400, gnl|oryCun1|scaffold_80936 (1032-595) | |
| 1-400, gnl|panTro1|chr17 (56657089-56657521) | |
| 1-400, gnl|panTro1|chr5 (3009700-3010120) | |
| 1-400, gnl|rheMac2|chr18 (57395472-57395904) | |
| 1-400, gnl|rheMac2|chr18 (57395458-57395897) | |
| 1-400, gnl|rn3|chr13 (13714056-13714476) | |
| 1-400, gnl|rn3|chr13 (13714042-13714471) | |
| 1-400, gnl|tetNig1|chrUn_random (45305238-45304829) | |
| 1-400, gnl|tetNig1|chrUn_random (45305240-45304830) | |
| 1-400, gnl|xenTro1|scaffold_78 (746747-746328) | |
| 1-400, gnl|xenTro1|scaffold_78 (742515-742091) | |
| 6-292, gnl|bosTau2|chr23 (31699423-31699135) | |
| 6-292, gnl|Hg17|chr6 (2893809-2893524) | |
| 6-292, gnl|Mm7|chr13 (33335854-33335573) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.1755) |