Non-Coding RNA Search

rton1204b_e13.y1

Sequence:


               
               CAAGCTTCCGTCCTCCGCGTCGTTTGGACCAGTGTCCAGAGCCATCCTTGCAGCGATGTC
CACTTCCAGCTCCACGCCCACGTCCACTTCCAGCTCCACGCCCACGCCCACTTCCGGCTC
CACGCCCACTTCCGGCTCCACGCCCATGCCCACTTCCAGCTCCACGTATGTGTTCATGTC
CAGAACCATGTGCAAGTCCAGAGTTCCGTCCTTGTCCTCCACCACGGCAACTTTCAGAAC
CCTGTCTGTGTCCGGAACCACGTCCAGCCCCACGTCCAGCCCCGCGTCCAGTCCCGTGTC
CTCGCCCAGCGCAGTGTGAGCCTACAGAGCCACGTCCATGTCCCCAGCGCTGTGAGCGCC
AAGAATCTTGCCCACTTCCAGAACCAATTCCTTTTCCATTGCCCTGCCCAAGCCCAGAGC
CATGTGTGGAGCCTCAGCGTTGTCCTAGCCCATGCTCAGGCCCAAATCCAAATCCATGCA
TAAGAGATCTAGGCTGTCATGAGTCCAGTCCATGCCACCTGGACACTGAGGCCCCCAGCT
GTGGAACAGCTGGTTATAACCTGGGGCAAGAGTGGCGCTAGCTGTAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGCTTCCGTCCTCCGCGTCGTTTGGACCAGTGTCCAGAGCCATCCTTGCAGCGATGTC
CACTTCCAGCTCCACGCCCACGTCCACTTCCAGCTCCACGCCCACGCCCACTTCCGGCTC
CACGCCCACTTCCGGCTCCACGCCCATGCCCACTTCCAGCTCCACGTATGTGTTCATGTC
CAGAACCATGTGCAAGTCCAGAGTTCCGTCCTTGTCCTCCACCACGGCAACTTTCAGAAC
CCTGTCTGTGTCCGGAACCACGTCCAGCCCCACGTCCAGCCCCGCGTCCAGTCCCGTGTC
CTCGCCCAGCGCAGTGTGAGCCTACAGAGCCACGTCCATGTCCCCAGCGCTGTGAGCGCC
AAGAATCTTGCCCACTTCCAGAACCAATTCCTTTTCCATTGCCCTGCCCAAGCCCAGAGC
CATGTGTGGAGCCTCAGCGTTGTCCTAGCCCATGCTCAGGCCCAAATCCAAATCCATGCA
TAAGAGATCTAGGCTGTCATGAGTCCAGTCCATGCCACCTGGACACTGAGGCCCCCAGCT
GTGGAACAGCTGGTTATAACCTGGGGCAAGAGTGGCGCTAGCTGTAGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               52-589, gnl|bosTau2|chr3 (14023774-14024292)
               

               
               52-589, gnl|Hg17|chr1 (149546261-149546776)
               

               
               52-589, gnl|Mm7|chr3 (92930511-92929918)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-589, gnl|bosTau2|chr3 (14023774-14024292)
               

               
               52-589, gnl|Hg17|chr1 (149546261-149546776)
               

               
               52-589, gnl|Mm7|chr3 (92930511-92929918)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (0.1755)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)

	52-589, gnl\|bosTau2\|chr3 (14023774-14024292)
	52-589, gnl\|Hg17\|chr1 (149546261-149546776)
	52-589, gnl\|Mm7\|chr3 (92930511-92929918)