Non-Coding RNA Search

rton1225b_p7.y1

Sequence:


               
               GGCCTTTTAAAATCTCTCTTAACTCCCTATGCTATGGAGATATGGATAAAACTATTAAGG
TAGAGTGTTATGATTATGACAATGATGGGTCACATGATCTCATTGGAACATTTCAAACCA
CCATGACAAAACTGAAAGAAGCCTCCAGAAACTCACCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCTTTTAAAATCTCTCTTAACTCCCTATGCTATGGAGATATGGATAAAACTATTAAGG
TAGAGTGTTATGATTATGACAATGATGGGTCACATGATCTCATTGGAACATTTCAAACCA
CCATGACAAAACTGAAAGAAGCCTCCAGAAACTCACCTA

Aligned organism(s): 18 entry(ies)

More info

Aligned organism(s): 18 entry(ies)

Help | Less info


               
               58-158, gnl|bosTau2|chr14 (48102203-48102103)
               

               
               58-158, gnl|canFam2|chr29 (35713870-35713979)
               

               
               58-158, gnl|danRer3|chr13 (12017973-12017869)
               

               
               58-158, gnl|dasNov1|scaffold_9191 (54170-54060)
               

               
               58-158, gnl|echTel1|scaffold_213780 (6194-6297)
               

               
               58-158, gnl|fr1|chrUn (216108324-216108218)
               

               
               58-158, gnl|galGal2|chr2 (122507678-122507785)
               

               
               58-158, gnl|hg17|chr8 (87626079-87626189)
               

               
               58-158, gnl|Hg17|chr8 (87626082-87626182)
               

               
               58-158, gnl|mm7|chr4 (19463780-19463670)
               

               
               58-158, gnl|Mm7|chr4 (19463775-19463675)
               

               
               58-158, gnl|monDom2|scaffold_3 (81518812-81518703)
               

               
               58-158, gnl|oryCun1|scaffold_199575 (158877-158767)
               

               
               58-158, gnl|panTro1|chr7 (89747156-89747266)
               

               
               58-158, gnl|rheMac2|chr8 (89123068-89123178)
               

               
               58-158, gnl|rn3|chr5 (34172352-34172242)
               

               
               58-158, gnl|tetNig1|chrUn_random (134053984-134053878)
               

               
               58-158, gnl|xenTro1|scaffold_492 (496085-495975)

Aligned organism(s): 18 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-158, gnl|bosTau2|chr14 (48102203-48102103)
               

               
               58-158, gnl|canFam2|chr29 (35713870-35713979)
               

               
               58-158, gnl|danRer3|chr13 (12017973-12017869)
               

               
               58-158, gnl|dasNov1|scaffold_9191 (54170-54060)
               

               
               58-158, gnl|echTel1|scaffold_213780 (6194-6297)
               

               
               58-158, gnl|fr1|chrUn (216108324-216108218)
               

               
               58-158, gnl|galGal2|chr2 (122507678-122507785)
               

               
               58-158, gnl|hg17|chr8 (87626079-87626189)
               

               
               58-158, gnl|Hg17|chr8 (87626082-87626182)
               

               
               58-158, gnl|mm7|chr4 (19463780-19463670)
               

               
               58-158, gnl|Mm7|chr4 (19463775-19463675)
               

               
               58-158, gnl|monDom2|scaffold_3 (81518812-81518703)
               

               
               58-158, gnl|oryCun1|scaffold_199575 (158877-158767)
               

               
               58-158, gnl|panTro1|chr7 (89747156-89747266)
               

               
               58-158, gnl|rheMac2|chr8 (89123068-89123178)
               

               
               58-158, gnl|rn3|chr5 (34172352-34172242)
               

               
               58-158, gnl|tetNig1|chrUn_random (134053984-134053878)
               

               
               58-158, gnl|xenTro1|scaffold_492 (496085-495975)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ton (0.1755)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)

	58-158, gnl\|bosTau2\|chr14 (48102203-48102103)
	58-158, gnl\|canFam2\|chr29 (35713870-35713979)
	58-158, gnl\|danRer3\|chr13 (12017973-12017869)
	58-158, gnl\|dasNov1\|scaffold_9191 (54170-54060)
	58-158, gnl\|echTel1\|scaffold_213780 (6194-6297)
	58-158, gnl\|fr1\|chrUn (216108324-216108218)
	58-158, gnl\|galGal2\|chr2 (122507678-122507785)
	58-158, gnl\|hg17\|chr8 (87626079-87626189)
	58-158, gnl\|Hg17\|chr8 (87626082-87626182)
	58-158, gnl\|mm7\|chr4 (19463780-19463670)
	58-158, gnl\|Mm7\|chr4 (19463775-19463675)
	58-158, gnl\|monDom2\|scaffold_3 (81518812-81518703)
	58-158, gnl\|oryCun1\|scaffold_199575 (158877-158767)
	58-158, gnl\|panTro1\|chr7 (89747156-89747266)
	58-158, gnl\|rheMac2\|chr8 (89123068-89123178)
	58-158, gnl\|rn3\|chr5 (34172352-34172242)
	58-158, gnl\|tetNig1\|chrUn_random (134053984-134053878)
	58-158, gnl\|xenTro1\|scaffold_492 (496085-495975)