rton1231b_p19.y1
|
CAAGAAGCAGAGTGCCTCCCTGCAAGCACAGATCTCTACTGACGCTGGGGCAGCCAGTTC
CGCCAAGAATGAGATAACAGAACTGAAACGCACCCTACAGGCCCTGGAAATTGAGCTGCA
GTCCCAACTGGTCATGAAAAGCTCCTTGGAGGGGACCTTGGCTGACACAGAAGCTGGCTA
TATGGCGCAGCTGTCACAAATCCAGATTCAGATCAGCAGCCTGGAGGAGCAGATCTGCCA
GATCCGGGGCGAGACCGAATGCCAGAACGCTGAATATGAGCAACTGCTGGACATCAAGAC
CCGCCTGGAGATGGAGATTGAGACCTACCGCCGCCTGCTCGATGGAGAAGGAGGTGGTTC
TGGTTTTGGAGGATGTGATTTTAGAAACTCAGGATCCAGAAACACAGGGTCCAGAAACAT
AGGCTCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAAGAAGCAGAGTGCCTCCCTGCAAGCACAGATCTCTACTGACGCTGGGGCAGCCAGTTC
CGCCAAGAATGAGATAACAGAACTGAAACGCACCCTACAGGCCCTGGAAATTGAGCTGCA
GTCCCAACTGGTCATGAAAAGCTCCTTGGAGGGGACCTTGGCTGACACAGAAGCTGGCTA
TATGGCGCAGCTGTCACAAATCCAGATTCAGATCAGCAGCCTGGAGGAGCAGATCTGCCA
GATCCGGGGCGAGACCGAATGCCAGAACGCTGAATATGAGCAACTGCTGGACATCAAGAC
CCGCCTGGAGATGGAGATTGAGACCTACCGCCGCCTGCTCGATGGAGAAGGAGGTGGTTC
TGGTTTTGGAGGATGTGATTTTAGAAACTCAGGATCCAGAAACACAGGGTCCAGAAACAT
AGGCTCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
136-354, gnl|bosTau2|chr19 (33976994-33977212) |
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136-354, gnl|canFam2|chr9 (25299107-25298882) |
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136-354, gnl|danRer3|chr19 (1138386-1138614) |
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136-354, gnl|dasNov1|scaffold_5382 (71678-71453) |
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136-354, gnl|echTel1|scaffold_319302 (83637-83410) |
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136-354, gnl|fr1|chrUn (127668483-127668265) |
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136-354, gnl|galGal2|chr27_random (632135-631910) |
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136-354, gnl|hg17|chr17 (36109217-36109442) |
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136-354, gnl|Hg17|chr17 (36109440-36109222) |
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136-354, gnl|loxAfr1|scaffold_16243 (17835-17606) |
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136-354, gnl|mm7|chr11 (99390283-99390508) |
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136-354, gnl|Mm7|chr11 (99390506-99390288) |
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136-354, gnl|monDom2|scaffold_18 (50089602-50089826) |
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136-354, gnl|oryCun1|scaffold_203191 (7199-6974) |
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136-354, gnl|panTro1|chr19 (39356290-39356515) |
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136-354, gnl|rheMac2|chr16 (50817174-50817399) |
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136-354, gnl|rn3|chr10 (88285025-88285248) |
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136-354, gnl|tetNig1|chr18 (5132919-5133134) |
|
136-354, gnl|xenTro1|scaffold_574 (405675-405450) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
136-354, gnl|bosTau2|chr19 (33976994-33977212) |
|
136-354, gnl|canFam2|chr9 (25299107-25298882) |
|
136-354, gnl|danRer3|chr19 (1138386-1138614) |
|
136-354, gnl|dasNov1|scaffold_5382 (71678-71453) |
|
136-354, gnl|echTel1|scaffold_319302 (83637-83410) |
|
136-354, gnl|fr1|chrUn (127668483-127668265) |
|
136-354, gnl|galGal2|chr27_random (632135-631910) |
|
136-354, gnl|hg17|chr17 (36109217-36109442) |
|
136-354, gnl|Hg17|chr17 (36109440-36109222) |
|
136-354, gnl|loxAfr1|scaffold_16243 (17835-17606) |
|
136-354, gnl|mm7|chr11 (99390283-99390508) |
|
136-354, gnl|Mm7|chr11 (99390506-99390288) |
|
136-354, gnl|monDom2|scaffold_18 (50089602-50089826) |
|
136-354, gnl|oryCun1|scaffold_203191 (7199-6974) |
|
136-354, gnl|panTro1|chr19 (39356290-39356515) |
|
136-354, gnl|rheMac2|chr16 (50817174-50817399) |
|
136-354, gnl|rn3|chr10 (88285025-88285248) |
|
136-354, gnl|tetNig1|chr18 (5132919-5133134) |
|
136-354, gnl|xenTro1|scaffold_574 (405675-405450) |
