Non-Coding RNA Search

rton1233b_b22.y1

Sequence:


               
               GTACCTGGAATTATTTCTTCCTAATGAAGCCAAATTCCACTGGTAATAGGTAAGGGGAAA
TATCAGTGTTCTTCATTTCTTCTTTTTTTCAGTTCTGTATGAAACATAGCAGGTAAGAAA
AAACTTTAAGTGGTACTTTTTATAGGGACTTGAGAAAACAGTATCTCTGCTGGTTCTGCT
GAGCTGTTCTTTCCACAGAGTCTAAACGCAATGTCATAAGAAGAGGTTTGCTGTAAAAAC
ATGTCTTTTTCTTTTCTGTGTTCATTGTAATTATGGCTGGTACTGAGAAGGTTCAATAAG
TCTCAATTTCTCTACCTCCCTTACTTGGAGAAATTTTGGAAATACACCCTGTGAATAAAA
TGATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTACCTGGAATTATTTCTTCCTAATGAAGCCAAATTCCACTGGTAATAGGTAAGGGGAAA
TATCAGTGTTCTTCATTTCTTCTTTTTTTCAGTTCTGTATGAAACATAGCAGGTAAGAAA
AAACTTTAAGTGGTACTTTTTATAGGGACTTGAGAAAACAGTATCTCTGCTGGTTCTGCT
GAGCTGTTCTTTCCACAGAGTCTAAACGCAATGTCATAAGAAGAGGTTTGCTGTAAAAAC
ATGTCTTTTTCTTTTCTGTGTTCATTGTAATTATGGCTGGTACTGAGAAGGTTCAATAAG
TCTCAATTTCTCTACCTCCCTTACTTGGAGAAATTTTGGAAATACACCCTGTGAATAAAA
TGATTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               9-369, gnl|bosTau2|chr5 (56942197-56941825)
               

               
               9-369, gnl|canFam2|chr27 (28046647-28046324)
               

               
               9-369, gnl|echTel1|scaffold_320964 (70533-70191)
               

               
               9-369, gnl|hg17|chr12 (22237558-22237885)
               

               
               9-369, gnl|Hg17|chr12 (22237960-22237596)
               

               
               9-369, gnl|loxAfr1|scaffold_5259 (38113-38435)
               

               
               9-369, gnl|mm7|chr6 (142912970-142913277)
               

               
               9-369, gnl|Mm7|chr6 (142913609-142913016)
               

               
               9-369, gnl|oryCun1|scaffold_206049 (126876-127206)
               

               
               9-369, gnl|panTro1|chrUn_random (48619737-48620064)
               

               
               9-369, gnl|rheMac2|chr11 (22516567-22516895)
               

               
               9-369, gnl|rn3|chr4 (180960572-180960874)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-369, gnl|bosTau2|chr5 (56942197-56941825)
               

               
               9-369, gnl|canFam2|chr27 (28046647-28046324)
               

               
               9-369, gnl|echTel1|scaffold_320964 (70533-70191)
               

               
               9-369, gnl|hg17|chr12 (22237558-22237885)
               

               
               9-369, gnl|Hg17|chr12 (22237960-22237596)
               

               
               9-369, gnl|loxAfr1|scaffold_5259 (38113-38435)
               

               
               9-369, gnl|mm7|chr6 (142912970-142913277)
               

               
               9-369, gnl|Mm7|chr6 (142913609-142913016)
               

               
               9-369, gnl|oryCun1|scaffold_206049 (126876-127206)
               

               
               9-369, gnl|panTro1|chrUn_random (48619737-48620064)
               

               
               9-369, gnl|rheMac2|chr11 (22516567-22516895)
               

               
               9-369, gnl|rn3|chr4 (180960572-180960874)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (0.1755)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)

	9-369, gnl\|bosTau2\|chr5 (56942197-56941825)
	9-369, gnl\|canFam2\|chr27 (28046647-28046324)
	9-369, gnl\|echTel1\|scaffold_320964 (70533-70191)
	9-369, gnl\|hg17\|chr12 (22237558-22237885)
	9-369, gnl\|Hg17\|chr12 (22237960-22237596)
	9-369, gnl\|loxAfr1\|scaffold_5259 (38113-38435)
	9-369, gnl\|mm7\|chr6 (142912970-142913277)
	9-369, gnl\|Mm7\|chr6 (142913609-142913016)
	9-369, gnl\|oryCun1\|scaffold_206049 (126876-127206)
	9-369, gnl\|panTro1\|chrUn_random (48619737-48620064)
	9-369, gnl\|rheMac2\|chr11 (22516567-22516895)
	9-369, gnl\|rn3\|chr4 (180960572-180960874)