Non-Coding RNA Search

rtra03_d1r1.y1

Sequence:


               
               TTTCCTCTAATTCACATGTTATCACGCCATTCCTGGAAATGCCTGTTATGAATGATCTGA
ATACTTCTAATGCTTGCATTTATAATAATACAAATGACATAGGCAGAATGGAAGCATCGT
CTGTGTCACCAGCTGACTTATATGGTATTTCTGATGCCAGCATGCTGCCTCATTGTCCTG
TGAACATGATAACGCCCAGTAACGACAGCATGAGGGAGACTGATAATCCGAGACTTGTGA
GCGTGAATCTTGAAAACCCTTCCTGTAATTCAGTGTTAGACCCAAGAGACTTGAGACAGC
TCCATCAGATGTCGTCTTCCAGTATGTCAACAGTCACCAGCTCCAGTACTACTGCTTTTG
TTTCCCAGTCAGAGGCATTTGAGGGATCTGACTTTAATTGTGCAGATAACAGTATGATAA
ACGAGTCAGGACCATCAAACAGTACTAATCCAAACAGTCATGGTTTTGTTCAAAATAGTC
AGTATTCAGGTATTGGCACTACGCAGAATGAACAATTGAGTGACTCATTTGCATTTGAGT
T

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCCTCTAATTCACATGTTATCACGCCATTCCTGGAAATGCCTGTTATGAATGATCTGA
ATACTTCTAATGCTTGCATTTATAATAATACAAATGACATAGGCAGAATGGAAGCATCGT
CTGTGTCACCAGCTGACTTATATGGTATTTCTGATGCCAGCATGCTGCCTCATTGTCCTG
TGAACATGATAACGCCCAGTAACGACAGCATGAGGGAGACTGATAATCCGAGACTTGTGA
GCGTGAATCTTGAAAACCCTTCCTGTAATTCAGTGTTAGACCCAAGAGACTTGAGACAGC
TCCATCAGATGTCGTCTTCCAGTATGTCAACAGTCACCAGCTCCAGTACTACTGCTTTTG
TTTCCCAGTCAGAGGCATTTGAGGGATCTGACTTTAATTGTGCAGATAACAGTATGATAA
ACGAGTCAGGACCATCAAACAGTACTAATCCAAACAGTCATGGTTTTGTTCAAAATAGTC
AGTATTCAGGTATTGGCACTACGCAGAATGAACAATTGAGTGACTCATTTGCATTTGAGT
T

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-541, gnl|bosTau2|chr11 (30012291-30012822)
               

               
               1-541, gnl|Hg17|chr2 (61060768-61061308)
               

               
               1-541, gnl|Mm7|chr11 (23694812-23694284)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-541, gnl|bosTau2|chr11 (30012291-30012822)
               

               
               1-541, gnl|Hg17|chr2 (61060768-61061308)
               

               
               1-541, gnl|Mm7|chr11 (23694812-23694284)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-541, gnl\|bosTau2\|chr11 (30012291-30012822)
	1-541, gnl\|Hg17\|chr2 (61060768-61061308)
	1-541, gnl\|Mm7\|chr11 (23694812-23694284)