Non-Coding RNA Search

rtra04_e9r1.y1

Sequence:


               
               CTCGTGCCGAATCGGCACGAGGCATTTCTTGTAAAACTTCCATGTATTCCACAGGGTTGC
TGAAACACAGCAAAGTGTGAAAGAGAAAACAACTACTCCCTCTACATTTTGTTTAAAAAT
AGAAAATTCTGGTGAGACTCTGAAACACAAGCCAAGATATGTATTAAGATTTCACATACT
TTCTCAGATTTGGCTTTTTTTAACCCCAAGTTATCATATGAAAGTACATTCTGATAGCTT
AAAGAATCAATATCTTTTACTTCGTCTATGAAAAATGTAATAATGACTGTTGATAATTTT
TTGTGAGATTCATTATCCTCATTTTACTCAACACATCCTCTCACCTCTAGCATCATGGCC
TTGAGATAAAACTGGCTAATGACTGACTTGTTTTCTTTTTTTCATTGAACTTTAAAATGT
GACACTCTCACTGATGTTCAGAGATATATTTGTTTGAGCCTTTGTGTAGATTATGTGTCA
TTAAGAAAAATATAAAGGACTTGATGAAAACTTAAGGCAAACTCTTAAAATAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGTGCCGAATCGGCACGAGGCATTTCTTGTAAAACTTCCATGTATTCCACAGGGTTGC
TGAAACACAGCAAAGTGTGAAAGAGAAAACAACTACTCCCTCTACATTTTGTTTAAAAAT
AGAAAATTCTGGTGAGACTCTGAAACACAAGCCAAGATATGTATTAAGATTTCACATACT
TTCTCAGATTTGGCTTTTTTTAACCCCAAGTTATCATATGAAAGTACATTCTGATAGCTT
AAAGAATCAATATCTTTTACTTCGTCTATGAAAAATGTAATAATGACTGTTGATAATTTT
TTGTGAGATTCATTATCCTCATTTTACTCAACACATCCTCTCACCTCTAGCATCATGGCC
TTGAGATAAAACTGGCTAATGACTGACTTGTTTTCTTTTTTTCATTGAACTTTAAAATGT
GACACTCTCACTGATGTTCAGAGATATATTTGTTTGAGCCTTTGTGTAGATTATGTGTCA
TTAAGAAAAATATAAAGGACTTGATGAAAACTTAAGGCAAACTCTTAAAATAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               23-533, gnl|bosTau2|chr3 (57267630-57267130)
               

               
               23-533, gnl|Hg17|chr1 (61378658-61379170)
               

               
               23-533, gnl|Mm7|chr4 (97275960-97276447)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-533, gnl|bosTau2|chr3 (57267630-57267130)
               

               
               23-533, gnl|Hg17|chr1 (61378658-61379170)
               

               
               23-533, gnl|Mm7|chr4 (97275960-97276447)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	23-533, gnl\|bosTau2\|chr3 (57267630-57267130)
	23-533, gnl\|Hg17\|chr1 (61378658-61379170)
	23-533, gnl\|Mm7\|chr4 (97275960-97276447)