Non-Coding RNA Search

rtra08_e3r1.y1

Sequence:


               
               AAACTTTAAAATGGTTTTAAAAGTGTGGCACATCTGCCTTATTAGTTTAAAGCAGTAAGA
ATGCCTAGCTATTCTCAGATAACTAACTGTATTTAAGGCATTAGAAGCTTTTAAAAAGGT
TCTCCTAAAAATATATGTAATATATGAAAACCTTAAAATTGAACTCTTTGAAATGTGTAA
CTGTGTAATACACAGATACTTGTTTCCATCTACATATTCCACATATAATGAACAATTTAT
GAGAACATTTTATTCTAATATGGAATAATTTGGTAAAGGTATAAAGAAGTATATTAAATT
TTTAAAACTTTATCTGTACTTTGACAAATAGTCTAGGTTCCAATCACATGATAATCATTA
TAGGGGGAGCAAGATTCTAGTTTAAATCTTAAATAGGAGTAAGATTAAGCTCTAAATTAC
CCTATCCTAAATATTGTTTATTAAGATTTCTTTTGGAAGGAGAAAGTGTAACTTTCTTTG
GTCACTGTTGACAACTGTAATCTAATTTTTTTATACCAAATACTGTAAAAAATTGGATTT
CGAAAATAATGACCATGAGCAGTATCTTTACTCTGAAAAGGAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACTTTAAAATGGTTTTAAAAGTGTGGCACATCTGCCTTATTAGTTTAAAGCAGTAAGA
ATGCCTAGCTATTCTCAGATAACTAACTGTATTTAAGGCATTAGAAGCTTTTAAAAAGGT
TCTCCTAAAAATATATGTAATATATGAAAACCTTAAAATTGAACTCTTTGAAATGTGTAA
CTGTGTAATACACAGATACTTGTTTCCATCTACATATTCCACATATAATGAACAATTTAT
GAGAACATTTTATTCTAATATGGAATAATTTGGTAAAGGTATAAAGAAGTATATTAAATT
TTTAAAACTTTATCTGTACTTTGACAAATAGTCTAGGTTCCAATCACATGATAATCATTA
TAGGGGGAGCAAGATTCTAGTTTAAATCTTAAATAGGAGTAAGATTAAGCTCTAAATTAC
CCTATCCTAAATATTGTTTATTAAGATTTCTTTTGGAAGGAGAAAGTGTAACTTTCTTTG
GTCACTGTTGACAACTGTAATCTAATTTTTTTATACCAAATACTGTAAAAAATTGGATTT
CGAAAATAATGACCATGAGCAGTATCTTTACTCTGAAAAGGAAAGA

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-313, gnl|bosTau2|chr9 (19434545-19434236)
               

               
               1-313, gnl|Hg17|chr6 (112497562-112498298)
               

               
               1-313, gnl|Mm7|chr10 (38930919-38930416)
               


               
               416-586, gnl|bosTau2|chr13 (33475988-33475818)
               

               
               416-586, gnl|Hg17|chr6 (112498306-112498468)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-313, gnl|bosTau2|chr9 (19434545-19434236)
               

               
               1-313, gnl|Hg17|chr6 (112497562-112498298)
               

               
               1-313, gnl|Mm7|chr10 (38930919-38930416)
               


               
               416-586, gnl|bosTau2|chr13 (33475988-33475818)
               

               
               416-586, gnl|Hg17|chr6 (112498306-112498468)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-313, gnl\|bosTau2\|chr9 (19434545-19434236)
	1-313, gnl\|Hg17\|chr6 (112497562-112498298)
	1-313, gnl\|Mm7\|chr10 (38930919-38930416)

	416-586, gnl\|bosTau2\|chr13 (33475988-33475818)
	416-586, gnl\|Hg17\|chr6 (112498306-112498468)