Non-Coding RNA Search

rtra10_c8r1.y1

Sequence:


               
               GGAAGGGTTATGTGGTCCGAATCAGTGGTGGGAACGACAAACAAGGATTCCCCATGAAGC
AGGGTGTCTTGACCCATGGCCGAGTCCGCCTGCTACTGAGTAAGGGGCATTCCTGTTACA
GACCAAGGAGGACTGGAGAAAGAAAGCGCAAATCAGTTCGGGGTTGCATTGTGGATGCCA
ATCTAAGTGTTCTCAATTTGGTCATCGTAAAAAAAGGGGAGAAGGATATTCCTGGACTCA
CCGATACCACTGTGCCTCGCCGCCTGGGGCCTAAAAGAGCTAGCAGGATCCGCAAACTTT
TCAATCTCTCTAAGGAAGACGATGTCCGTCAGTATGTAGTGAGAAAGCCCCTAAACAAAG
AAGGAAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGTCTTGTTACTCCACGTGTTC
TGCAACACAAACGTCGCCGTATTGCTCTGAAGAAACAACGTACCAAGAAAAATAAGGAAG
AGGCTGCAGAATATGCTAAACTTTTGGCCAAGAGAATGAAGGAGGCCAAAGAAAAACGTC
AGGAACAGATTGCCAAGAGACGGAGGCTATCCTCTCTGAGAGCATCTACCTCTAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGGGTTATGTGGTCCGAATCAGTGGTGGGAACGACAAACAAGGATTCCCCATGAAGC
AGGGTGTCTTGACCCATGGCCGAGTCCGCCTGCTACTGAGTAAGGGGCATTCCTGTTACA
GACCAAGGAGGACTGGAGAAAGAAAGCGCAAATCAGTTCGGGGTTGCATTGTGGATGCCA
ATCTAAGTGTTCTCAATTTGGTCATCGTAAAAAAAGGGGAGAAGGATATTCCTGGACTCA
CCGATACCACTGTGCCTCGCCGCCTGGGGCCTAAAAGAGCTAGCAGGATCCGCAAACTTT
TCAATCTCTCTAAGGAAGACGATGTCCGTCAGTATGTAGTGAGAAAGCCCCTAAACAAAG
AAGGAAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGTCTTGTTACTCCACGTGTTC
TGCAACACAAACGTCGCCGTATTGCTCTGAAGAAACAACGTACCAAGAAAAATAAGGAAG
AGGCTGCAGAATATGCTAAACTTTTGGCCAAGAGAATGAAGGAGGCCAAAGAAAAACGTC
AGGAACAGATTGCCAAGAGACGGAGGCTATCCTCTCTGAGAGCATCTACCTCTAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9PU21_TRASC

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9PU21_TRASC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-596, gnl|bosTau2|chr11 (69257317-69257912)
               

               
               1-596, gnl|Hg17|chr11 (101671131-101671726)
               

               
               1-596, gnl|Mm7|chr17 (72777762-72778357)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-596, gnl|bosTau2|chr11 (69257317-69257912)
               

               
               1-596, gnl|Hg17|chr11 (101671131-101671726)
               

               
               1-596, gnl|Mm7|chr17 (72777762-72778357)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-596, gnl\|bosTau2\|chr11 (69257317-69257912)
	1-596, gnl\|Hg17\|chr11 (101671131-101671726)
	1-596, gnl\|Mm7\|chr17 (72777762-72778357)