Non-Coding RNA Search

rtra14_o3r1.y1

Sequence:


               
               GTGCCATTAATTTCTATTTATCATCTCTAAGAAACTCAGAGAAAGTTTGAATTTGATGTT
ACCTGAGAAGGTTGTGCAAATAGGAAGTAGTCAATATATAGTGAGTGGTGAAAAATATAT
TTTTAAGCAGGAGAATAATATAATAAAATTACCAAAAGAAGTTTACTTTACATCCGCCTG
TAGGTTGGGTTGAAAACTGGAAAATGATCAAGAAGGCTCTTTGATAAATTCAGGTGTAAG
GATTTTAGACCTTGAACTGGGGAGGTGACGATAGTAATTGAAAAATACTAAAAGCCATTT
CTCGAGAGGATTAGTAGAACTTGGAGGCTGCCTAGTCATGAGCAGAAAGTTGAGAGGAAT
GAGTGAAAATGAATCCAAGATTTTAAACTGGAGTGAGTGCTTTTCTGAGAGTCGGAATGA
TGGAAGACCATGATCTCCAGTAGGAGGCGCCAGAGAGTTGAGTTCAGTCCTTAAACAGAG
GACTCGGAAATGTAGAATCATAAAGGGCTAGAAGTTTATTTTCTTAATGTACAGTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCATTAATTTCTATTTATCATCTCTAAGAAACTCAGAGAAAGTTTGAATTTGATGTT
ACCTGAGAAGGTTGTGCAAATAGGAAGTAGTCAATATATAGTGAGTGGTGAAAAATATAT
TTTTAAGCAGGAGAATAATATAATAAAATTACCAAAAGAAGTTTACTTTACATCCGCCTG
TAGGTTGGGTTGAAAACTGGAAAATGATCAAGAAGGCTCTTTGATAAATTCAGGTGTAAG
GATTTTAGACCTTGAACTGGGGAGGTGACGATAGTAATTGAAAAATACTAAAAGCCATTT
CTCGAGAGGATTAGTAGAACTTGGAGGCTGCCTAGTCATGAGCAGAAAGTTGAGAGGAAT
GAGTGAAAATGAATCCAAGATTTTAAACTGGAGTGAGTGCTTTTCTGAGAGTCGGAATGA
TGGAAGACCATGATCTCCAGTAGGAGGCGCCAGAGAGTTGAGTTCAGTCCTTAAACAGAG
GACTCGGAAATGTAGAATCATAAAGGGCTAGAAGTTTATTTTCTTAATGTACAGTCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-534, gnl|bosTau2|chr3 (40754977-40754449)
               

               
               2-534, gnl|Hg17|chr1 (90176530-90177072)
               

               
               2-534, gnl|Mm7|chr5 (105056857-105057299)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-534, gnl|bosTau2|chr3 (40754977-40754449)
               

               
               2-534, gnl|Hg17|chr1 (90176530-90177072)
               

               
               2-534, gnl|Mm7|chr5 (105056857-105057299)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	2-534, gnl\|bosTau2\|chr3 (40754977-40754449)
	2-534, gnl\|Hg17\|chr1 (90176530-90177072)
	2-534, gnl\|Mm7\|chr5 (105056857-105057299)