Non-Coding RNA Search

rtra16_e23r1.y1

Sequence:


               
               GAAGAAAATCACTAAGAGGACATGTTGGTAGAATCATTCTGGAGAACAATCATGTCATTG
ACACGTATTCAAGGATTTTATTTCCCATTGTGTATATTATGTTTAATTTGTTTTACTGGA
GTATTTATGTGTGAGGAGTAATTTCTCATATATAAAACTTGTTTTGGAGTCAGATTATGT
TAACAACAACAACAAACAGTTCTTAACTATGAGTTGGATGGTACTAGACTAACTTAGAGC
CAGCCAGTCACCTCCTCTGGCTTAAAGATTTGAAAGTTGACTGATTTACATCTAGAAAAG
AGTTTAAGGTCCTATGAGAATTTGACTCCTTCTCTAAGAGTCACAGGCATGTATGTTATG
GAAAAACAATTTCCATAAGGAAGGTCTTTTTAACTACTTCAACTGGACCCTCCTTGCTTT
CTAAATGTAAATTATCTTCATTTAACTATGGAATGAAGCTGGACTGGGACAATAATTCAA
GGAGAGTTTCTTCCTTAGTGCTAGCCAAGTACCTGATTACCTACCAGAGCTGAATCCTCC
TAAGTAAGAACGTCATCATCAAAGTGGTACCCCAGACACTCACACAGCTGAGATTCCCAC
GAAGAGCCTCCCTCCCTCTTCCATCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAAAATCACTAAGAGGACATGTTGGTAGAATCATTCTGGAGAACAATCATGTCATTG
ACACGTATTCAAGGATTTTATTTCCCATTGTGTATATTATGTTTAATTTGTTTTACTGGA
GTATTTATGTGTGAGGAGTAATTTCTCATATATAAAACTTGTTTTGGAGTCAGATTATGT
TAACAACAACAACAAACAGTTCTTAACTATGAGTTGGATGGTACTAGACTAACTTAGAGC
CAGCCAGTCACCTCCTCTGGCTTAAAGATTTGAAAGTTGACTGATTTACATCTAGAAAAG
AGTTTAAGGTCCTATGAGAATTTGACTCCTTCTCTAAGAGTCACAGGCATGTATGTTATG
GAAAAACAATTTCCATAAGGAAGGTCTTTTTAACTACTTCAACTGGACCCTCCTTGCTTT
CTAAATGTAAATTATCTTCATTTAACTATGGAATGAAGCTGGACTGGGACAATAATTCAA
GGAGAGTTTCTTCCTTAGTGCTAGCCAAGTACCTGATTACCTACCAGAGCTGAATCCTCC
TAAGTAAGAACGTCATCATCAAAGTGGTACCCCAGACACTCACACAGCTGAGATTCCCAC
GAAGAGCCTCCCTCCCTCTTCCATCTC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

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               3-465, gnl|bosTau2|chr1 (22139791-22139321)
               

               
               3-465, gnl|Hg17|chr3 (99188348-99187894)
               

               
               3-465, gnl|Mm7|chr16 (59397421-59397949)
               


               
               470-614, gnl|bosTau2|chr1 (22139097-22138953)
               

               
               470-614, gnl|Hg17|chr3 (99187888-99187745)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-465, gnl|bosTau2|chr1 (22139791-22139321)
               

               
               3-465, gnl|Hg17|chr3 (99188348-99187894)
               

               
               3-465, gnl|Mm7|chr16 (59397421-59397949)
               


               
               470-614, gnl|bosTau2|chr1 (22139097-22138953)
               

               
               470-614, gnl|Hg17|chr3 (99187888-99187745)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	3-465, gnl\|bosTau2\|chr1 (22139791-22139321)
	3-465, gnl\|Hg17\|chr3 (99188348-99187894)
	3-465, gnl\|Mm7\|chr16 (59397421-59397949)

	470-614, gnl\|bosTau2\|chr1 (22139097-22138953)
	470-614, gnl\|Hg17\|chr3 (99187888-99187745)