Non-Coding RNA Search

rtra17_a20r1.y1

Sequence:


               
               CTTTCTAACTGCTTGTAAGTTAATTTTATCTAGTAACACCAAAAAACTAATATTAGTGAA
ATATTTTTGTACATGTCTTTTTTTATTTGAAGGTCATCAACATTCCATAATTTTGTCAAA
ATAGCACTAACCAAAAACCCAAAAAAAAGACCAACTGCTGAAAGACTTCTGACTGTAAGT
CATTCAATTTATAGGAGATTTTTCTGTAGTCATGCAATAAATAGGCATATCACAAGAACA
TCAGTATTCAGATTTTTAATATAAAAATATTAGTGATTGCTTACAGCGGGGATCAGCAAA
CAttctataaagagccaaagagtaaatattttaggcctttgtgaaccatatggtctctgt
tgcaactactccgttttgccattgtaacacaaaagcaaccaaagaTGGTACACATGAAAG
ATATGGCTTTCATACGCAATAAAGCTTTATTTATAAAAGGGGGCAGTGCACCAGATTTTG
CCTGTGGGCTGTAGTTTGCCAACCCCTGCCTTACAGAAAACTCTTAAAAATGTTGCTTTC
ATCTAAAATTAACTTCTTTTCTTGGTTTCTTAAGTAAATTTATAGAATGGGGGAAAAACT
GTAATTGCAATGTATACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCTAACTGCTTGTAAGTTAATTTTATCTAGTAACACCAAAAAACTAATATTAGTGAA
ATATTTTTGTACATGTCTTTTTTTATTTGAAGGTCATCAACATTCCATAATTTTGTCAAA
ATAGCACTAACCAAAAACCCAAAAAAAAGACCAACTGCTGAAAGACTTCTGACTGTAAGT
CATTCAATTTATAGGAGATTTTTCTGTAGTCATGCAATAAATAGGCATATCACAAGAACA
TCAGTATTCAGATTTTTAATATAAAAATATTAGTGATTGCTTACAGCGGGGATCAGCAAA
CAttctataaagagccaaagagtaaatattttaggcctttgtgaaccatatggtctctgt
tgcaactactccgttttgccattgtaacacaaaagcaaccaaagaTGGTACACATGAAAG
ATATGGCTTTCATACGCAATAAAGCTTTATTTATAAAAGGGGGCAGTGCACCAGATTTTG
CCTGTGGGCTGTAGTTTGCCAACCCCTGCCTTACAGAAAACTCTTAAAAATGTTGCTTTC
ATCTAAAATTAACTTCTTTTCTTGGTTTCTTAAGTAAATTTATAGAATGGGGGAAAAACT
GTAATTGCAATGTATACAT

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-265, gnl|bosTau2|chr10 (28898485-28898221)
               

               
               1-265, gnl|Hg17|chr14 (50000686-50000433)
               

               
               1-265, gnl|Mm7|chr12 (67784052-67783758)
               


               
               327-518, gnl|bosTau2|chr10 (28898198-28898009)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-265, gnl|bosTau2|chr10 (28898485-28898221)
               

               
               1-265, gnl|Hg17|chr14 (50000686-50000433)
               

               
               1-265, gnl|Mm7|chr12 (67784052-67783758)
               


               
               327-518, gnl|bosTau2|chr10 (28898198-28898009)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-265, gnl\|bosTau2\|chr10 (28898485-28898221)
	1-265, gnl\|Hg17\|chr14 (50000686-50000433)
	1-265, gnl\|Mm7\|chr12 (67784052-67783758)

	327-518, gnl\|bosTau2\|chr10 (28898198-28898009)