Non-Coding RNA Search

rtra21_j1r1.y1

Sequence:


               
               TTTCTCTGTCAGGTTAGAGAGGGCATAGTCCTTATTTGTGCCAAGGGACCCTTCATGATG
ATGCAGTACTGGCAAGATGGGCAGTTGCAGTGCCTGCTTGTTTATATTTGTGATACGAAG
GGGAAAAGCTGTGAAACTAATTTACTAGGTTTGGCTACTTTGAACATTCTTGAAAATAAT
ATTGTGAATAATTATTTGTTGTCTTCGTGATTTCCATCTAAATAGTGCCTGGCACATGTT
AAGTGCTATAAAAGTATTGGCTTCTCCCACCAGTACCACCATTTTTTATTATTATTATTA
AATATCCATTGGTTCAAAACCATGGAGTCAGCTAAATCATACCTGCTACTATACAAAATG
TTGGAAAGCTAAGAAAAAGTATTCAGCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTCTGTCAGGTTAGAGAGGGCATAGTCCTTATTTGTGCCAAGGGACCCTTCATGATG
ATGCAGTACTGGCAAGATGGGCAGTTGCAGTGCCTGCTTGTTTATATTTGTGATACGAAG
GGGAAAAGCTGTGAAACTAATTTACTAGGTTTGGCTACTTTGAACATTCTTGAAAATAAT
ATTGTGAATAATTATTTGTTGTCTTCGTGATTTCCATCTAAATAGTGCCTGGCACATGTT
AAGTGCTATAAAAGTATTGGCTTCTCCCACCAGTACCACCATTTTTTATTATTATTATTA
AATATCCATTGGTTCAAAACCATGGAGTCAGCTAAATCATACCTGCTACTATACAAAATG
TTGGAAAGCTAAGAAAAAGTATTCAGCAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-389, gnl|bosTau2|chr17 (18479318-18479695)
               

               
               1-389, gnl|Hg17|chr4 (129004946-129005306)
               

               
               1-389, gnl|Mm7|chr3 (40470862-40471244)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-389, gnl|bosTau2|chr17 (18479318-18479695)
               

               
               1-389, gnl|Hg17|chr4 (129004946-129005306)
               

               
               1-389, gnl|Mm7|chr3 (40470862-40471244)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-389, gnl\|bosTau2\|chr17 (18479318-18479695)
	1-389, gnl\|Hg17\|chr4 (129004946-129005306)
	1-389, gnl\|Mm7\|chr3 (40470862-40471244)