Non-Coding RNA Search

rtra21_n19r1.y1

Sequence:


               
               CACTGGTCCTAATTCTCTACATCACCTGCGGAGGTTATGGAGGCAATGGTAACAGCAGCG
TAGGAAAAGGTTTGATTAGTCGGTGATGATTTCAGTGATCACAGAGGGTCAAAGCTACTG
GAATTTAACCCACTGGAAATGAGCCCTGGGAAGAGTACCTTGAAGTTCTAAGGACTTGAC
TGCTCAAATTCCATTCTTCCCACATCTGCCGGTACTTTCGCCCAGGAGTTATCTGGGAAC
AATAAGCCACTTGTACGGCACAGTCAATAGGTGCAGTACTGTAGCTGAGAGCCATTCAAC
CTGTACAAGTCAGCATGTAAGTTTAATTAGTGGGATATTAATTGAGTAAGGCATTGAGAC
AGCGCGTGAGTCACTGCTTTAAAGGAAGTATACCTTGTCGCAAGACCCAGTTATTGGCAG
ACTGTTTGCCTCATGAAAGATGGGAAAGTAGAAAATCAGTCAAATAATAAAGTACTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACTGGTCCTAATTCTCTACATCACCTGCGGAGGTTATGGAGGCAATGGTAACAGCAGCG
TAGGAAAAGGTTTGATTAGTCGGTGATGATTTCAGTGATCACAGAGGGTCAAAGCTACTG
GAATTTAACCCACTGGAAATGAGCCCTGGGAAGAGTACCTTGAAGTTCTAAGGACTTGAC
TGCTCAAATTCCATTCTTCCCACATCTGCCGGTACTTTCGCCCAGGAGTTATCTGGGAAC
AATAAGCCACTTGTACGGCACAGTCAATAGGTGCAGTACTGTAGCTGAGAGCCATTCAAC
CTGTACAAGTCAGCATGTAAGTTTAATTAGTGGGATATTAATTGAGTAAGGCATTGAGAC
AGCGCGTGAGTCACTGCTTTAAAGGAAGTATACCTTGTCGCAAGACCCAGTTATTGGCAG
ACTGTTTGCCTCATGAAAGATGGGAAAGTAGAAAATCAGTCAAATAATAAAGTACTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-478, gnl|bosTau2|chr3 (57180256-57179783)
               

               
               1-478, gnl|Hg17|chr1 (61465491-61465940)
               

               
               1-478, gnl|Mm7|chr4 (97356578-97357029)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chr3 (57180256-57179783)
               

               
               1-478, gnl|Hg17|chr1 (61465491-61465940)
               

               
               1-478, gnl|Mm7|chr4 (97356578-97357029)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-478, gnl\|bosTau2\|chr3 (57180256-57179783)
	1-478, gnl\|Hg17\|chr1 (61465491-61465940)
	1-478, gnl\|Mm7\|chr4 (97356578-97357029)