Non-Coding RNA Search

rtra22_h17r1.y1

Sequence:


               
               ATTACTATTAAAAGCATGGTACCTGATAAGTCCTTAAGAAATGTCTACTATCTTCCCCTC
ACTTATAACCAAATTTAAACTCTTGACTCTTAGTCAAAGATTTTAGAAAGTGCCCTTTCg
gagtcctcttgtggagcatcgggttaaggatccagcattaacactgcagtggcttgggtg
tctgctgtggcgtgggtttgatccttggcccaggaacttccacgtgctgCATGTGCAGCC
AAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAGAAAGAACGTTATCTTTAGCCTTTTGT
AATTTTTGAAAAAACCCAAACAAATCCAAACCAGACAAAGCAAACTGCAAATGACCAAAA
GACACAGTCAACAGAGAGCATCCCCATTCCTTAGACAGCCTTTGCCCACAAAAGTGATAG
TTTCTCTAGACTCTTTCATGCTTATGCCAGGTATTTTATTACACATATATGTCTTTTTTT
AATCTCTCTCTGCCATTCCCCCAGTACCACCAATTTTGTTCTTTCTGGTGATTCCTCTTA
AATCCTTAAGTGGTACCATGATGCTGTTACTTGAGTCATTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTACTATTAAAAGCATGGTACCTGATAAGTCCTTAAGAAATGTCTACTATCTTCCCCTC
ACTTATAACCAAATTTAAACTCTTGACTCTTAGTCAAAGATTTTAGAAAGTGCCCTTTCg
gagtcctcttgtggagcatcgggttaaggatccagcattaacactgcagtggcttgggtg
tctgctgtggcgtgggtttgatccttggcccaggaacttccacgtgctgCATGTGCAGCC
AAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAAGAAAGAACGTTATCTTTAGCCTTTTGT
AATTTTTGAAAAAACCCAAACAAATCCAAACCAGACAAAGCAAACTGCAAATGACCAAAA
GACACAGTCAACAGAGAGCATCCCCATTCCTTAGACAGCCTTTGCCCACAAAAGTGATAG
TTTCTCTAGACTCTTTCATGCTTATGCCAGGTATTTTATTACACATATATGTCTTTTTTT
AATCTCTCTCTGCCATTCCCCCAGTACCACCAATTTTGTTCTTTCTGGTGATTCCTCTTA
AATCCTTAAGTGGTACCATGATGCTGTTACTTGAGTCATTCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               317-583, gnl|bosTau2|chr1 (64655463-64655194)
               

               
               317-583, gnl|Hg17|chr3 (173072339-173072613)
               

               
               317-583, gnl|Mm7|chr3 (27682296-27682022)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               317-583, gnl|bosTau2|chr1 (64655463-64655194)
               

               
               317-583, gnl|Hg17|chr3 (173072339-173072613)
               

               
               317-583, gnl|Mm7|chr3 (27682296-27682022)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	317-583, gnl\|bosTau2\|chr1 (64655463-64655194)
	317-583, gnl\|Hg17\|chr3 (173072339-173072613)
	317-583, gnl\|Mm7\|chr3 (27682296-27682022)