Non-Coding RNA Search

rtra25_j14r1.y1

Sequence:


               
               AGGATCTAGAAAGTAAACACAACAAACAGTTAGGAATGTGAGAATCATGGTTGAGGAGGC
AGATGTTCTGTGCTTCTCCATCCATGCTCTCCACCTCACATTTCTTGCTGTCTTTCATTT
TCTGGTTAAGTGTATCTTGGTGTGTTGCCTGGGAGTTTAGATGTGTTATTATAACACAGA
AAAGAATTATGTAAGACAAAGCCCAGCTTTCTTTTCTGTTCCCTTTCAGCCCTCCTATAA
CTTAGACCAAACTCAACTATTTTCTTCCATTATGTAGAATGGCTCCTGAAAAGGAAGACT
GTAGAAAAAAGAAAACTTTCAGGGAACAATGAGAAACAAATGCATTATGATCTCCTTAAC
AGGGAACTGTGAGTGAGAGTCATGCCCAAGAAATAGCTTCTTTAAAATACCTTTTTTTTT
TTCAATTTTAAAAGGAATGCATGCACATGGTAAACAAAAATAATTCAAATTGTAAGGAAA
AGACAAAACAAGAAGTAAAAATTCCCTTTTCCAACATCCTCTCCCAGCTCTTGAATCCCA
CTGCCAGAACTGTTAGCCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGATCTAGAAAGTAAACACAACAAACAGTTAGGAATGTGAGAATCATGGTTGAGGAGGC
AGATGTTCTGTGCTTCTCCATCCATGCTCTCCACCTCACATTTCTTGCTGTCTTTCATTT
TCTGGTTAAGTGTATCTTGGTGTGTTGCCTGGGAGTTTAGATGTGTTATTATAACACAGA
AAAGAATTATGTAAGACAAAGCCCAGCTTTCTTTTCTGTTCCCTTTCAGCCCTCCTATAA
CTTAGACCAAACTCAACTATTTTCTTCCATTATGTAGAATGGCTCCTGAAAAGGAAGACT
GTAGAAAAAAGAAAACTTTCAGGGAACAATGAGAAACAAATGCATTATGATCTCCTTAAC
AGGGAACTGTGAGTGAGAGTCATGCCCAAGAAATAGCTTCTTTAAAATACCTTTTTTTTT
TTCAATTTTAAAAGGAATGCATGCACATGGTAAACAAAAATAATTCAAATTGTAAGGAAA
AGACAAAACAAGAAGTAAAAATTCCCTTTTCCAACATCCTCTCCCAGCTCTTGAATCCCA
CTGCCAGAACTGTTAGCCATT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-392, gnl|bosTau2|chr3 (20501147-20500759)
               

               
               3-392, gnl|Hg17|chr1 (119415613-119415991)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-392, gnl|bosTau2|chr3 (20501147-20500759)
               

               
               3-392, gnl|Hg17|chr1 (119415613-119415991)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	3-392, gnl\|bosTau2\|chr3 (20501147-20500759)
	3-392, gnl\|Hg17\|chr1 (119415613-119415991)