Non-Coding RNA Search

rtra30_p3r1.y1

Sequence:


               
               GCAGACTGCACTCCAGGCTGGCTGCCCTGCAGATTCCCTAAATAGGAACAGGATGAAGGC
CAGGCTTAAGAGGTTACCATAGCTCTGCTCTCACACTTTGAGGAATCAGTCACTCCACTT
CCCAGTATAAGTTGTTTCAATTACTCTGTACAATCTATTTAGAGGTGAGCAGCTTGCAAG
GAGAACTCATTGTCTAATCTAAATGAGGAAGCAGTTATTACTTTCTGCAGTCCAATGTAC
TTTGAGTCTGTAGGGTCAAATATCAACCACATCTCATGTAACTTTGCACTTTGGAAGGTA
TATATCCTTTTAATGTCAGTTATTTATCCCTGCTTTTCTGAAATCCTTTTTTTTTTCCTA
TTAACTTTACAAAATCAAGTTTTTCTTCCCCCTCCTTAGCCATCTACAGTCTTTTCTAAT
TTTAGAATTTGTTATAAGGTGAACACCACAGCCTCTTCTATACATTGCTTAATGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGACTGCACTCCAGGCTGGCTGCCCTGCAGATTCCCTAAATAGGAACAGGATGAAGGC
CAGGCTTAAGAGGTTACCATAGCTCTGCTCTCACACTTTGAGGAATCAGTCACTCCACTT
CCCAGTATAAGTTGTTTCAATTACTCTGTACAATCTATTTAGAGGTGAGCAGCTTGCAAG
GAGAACTCATTGTCTAATCTAAATGAGGAAGCAGTTATTACTTTCTGCAGTCCAATGTAC
TTTGAGTCTGTAGGGTCAAATATCAACCACATCTCATGTAACTTTGCACTTTGGAAGGTA
TATATCCTTTTAATGTCAGTTATTTATCCCTGCTTTTCTGAAATCCTTTTTTTTTTCCTA
TTAACTTTACAAAATCAAGTTTTTCTTCCCCCTCCTTAGCCATCTACAGTCTTTTCTAAT
TTTAGAATTTGTTATAAGGTGAACACCACAGCCTCTTCTATACATTGCTTAATGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-476, gnl|bosTau2|chr29 (19825879-19825405)
               

               
               1-476, gnl|Hg17|chr10 (65058605-65058132)
               

               
               1-476, gnl|Mm7|chr10 (66591134-66591580)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-476, gnl|bosTau2|chr29 (19825879-19825405)
               

               
               1-476, gnl|Hg17|chr10 (65058605-65058132)
               

               
               1-476, gnl|Mm7|chr10 (66591134-66591580)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-476, gnl\|bosTau2\|chr29 (19825879-19825405)
	1-476, gnl\|Hg17\|chr10 (65058605-65058132)
	1-476, gnl\|Mm7\|chr10 (66591134-66591580)