Non-Coding RNA Search

rtra34_o4.y1

Sequence:


               
               AGAAAATTTCCCCTAATTATAATTGAGTTTCTATAGTGTACATGTTTGGTTTTTGGGGTG
GGGGAAGGGAGGGGGAGGTATTATTTTCACTGTTATTTTCGGGAATAATTTAGAAGTTGA
AGATCCCACCTTCAAACAGAACCTCTCCTATCCTGAACAGGACCACACTTGACAGGATGT
GATAAGCTTGTACTTTGCTGATGATGTCAACTTTCCTCTGATGTCAACTTTTGTGTGTGT
TTGTGTGATACAAGTTTAGGTATGCTCATTAATTTGGAGACTGGCTCCGGTATCACAGTA
TCACATCTAAATGCATTCTACGCACCCTTCTCAAAATTCAACACTTGGGTATCCTTTCAT
TGCGTTTTGCTAAACAGAGACGTGATCACTTTTATAGAATTACTAAGTGTGCCTTTAGTA
GAGTGTATAGAATCCTAGGAACAGCATGGCCTTAAATTTGTGAAAGAAAGATTTAggagt
tcctgtcgtggcgcagtggttaacgaatccga

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAAATTTCCCCTAATTATAATTGAGTTTCTATAGTGTACATGTTTGGTTTTTGGGGTG
GGGGAAGGGAGGGGGAGGTATTATTTTCACTGTTATTTTCGGGAATAATTTAGAAGTTGA
AGATCCCACCTTCAAACAGAACCTCTCCTATCCTGAACAGGACCACACTTGACAGGATGT
GATAAGCTTGTACTTTGCTGATGATGTCAACTTTCCTCTGATGTCAACTTTTGTGTGTGT
TTGTGTGATACAAGTTTAGGTATGCTCATTAATTTGGAGACTGGCTCCGGTATCACAGTA
TCACATCTAAATGCATTCTACGCACCCTTCTCAAAATTCAACACTTGGGTATCCTTTCAT
TGCGTTTTGCTAAACAGAGACGTGATCACTTTTATAGAATTACTAAGTGTGCCTTTAGTA
GAGTGTATAGAATCCTAGGAACAGCATGGCCTTAAATTTGTGAAAGAAAGATTTAggagt
tcctgtcgtggcgcagtggttaacgaatccga

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-295, gnl|bosTau2|chr20 (13960900-13960591)
               

               
               1-295, gnl|Hg17|chr5 (53240722-53240456)
               

               
               1-295, gnl|Mm7|chr13 (111309841-111310110)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-295, gnl|bosTau2|chr20 (13960900-13960591)
               

               
               1-295, gnl|Hg17|chr5 (53240722-53240456)
               

               
               1-295, gnl|Mm7|chr13 (111309841-111310110)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	1-295, gnl\|bosTau2\|chr20 (13960900-13960591)
	1-295, gnl\|Hg17\|chr5 (53240722-53240456)
	1-295, gnl\|Mm7\|chr13 (111309841-111310110)