Non-Coding RNA Search

rtra35_g19.y1

Sequence:


               
               GGAAGGCCACCTGCTCCAGATGCTGGCTAACAATGCATTGTTTTTTAACTTGGGCACACA
GGAAGAAAGATAACAGGCTTTGAAGTACATCATGCTTGGGTTGGAATTCTGGTTCCACCA
CTTCCTTTGTGACCTTGGGCCAGGTACTTAACCTTTCCATGCAGCAAGTGTTTTCATTCA
TAAAATAGAGATATGCCTATCATGAAGTGTTGCTGGGAAAATTAAATGATGTATGATAAT
AAGGCATAGTCATTGGTACTTAACGTACTTAACCTAAATGCCAGAGAAGGGATTTCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGGCCACCTGCTCCAGATGCTGGCTAACAATGCATTGTTTTTTAACTTGGGCACACA
GGAAGAAAGATAACAGGCTTTGAAGTACATCATGCTTGGGTTGGAATTCTGGTTCCACCA
CTTCCTTTGTGACCTTGGGCCAGGTACTTAACCTTTCCATGCAGCAAGTGTTTTCATTCA
TAAAATAGAGATATGCCTATCATGAAGTGTTGCTGGGAAAATTAAATGATGTATGATAAT
AAGGCATAGTCATTGGTACTTAACGTACTTAACCTAAATGCCAGAGAAGGGATTTCAC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               8-298, gnl|bosTau2|chr16 (22909659-22909956)
               

               
               8-298, gnl|canFam2|chr7 (32437880-32437391)
               

               
               8-298, gnl|dasNov1|scaffold_2156 (109693-110131)
               

               
               8-298, gnl|echTel1|scaffold_282412 (60307-60775)
               

               
               8-298, gnl|hg17|chr1 (165825154-165825643)
               

               
               8-298, gnl|Hg17|chr1 (165825355-165825650)
               

               
               8-298, gnl|mm7|chr1 (164409732-164409242)
               

               
               8-298, gnl|Mm7|chr1 (164409522-164409233)
               

               
               8-298, gnl|panTro1|chr1 (148090533-148091022)
               

               
               8-298, gnl|rheMac2|chr1 (198857264-198857782)
               

               
               8-298, gnl|rn3|chr13 (80235211-80234735)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-298, gnl|bosTau2|chr16 (22909659-22909956)
               

               
               8-298, gnl|canFam2|chr7 (32437880-32437391)
               

               
               8-298, gnl|dasNov1|scaffold_2156 (109693-110131)
               

               
               8-298, gnl|echTel1|scaffold_282412 (60307-60775)
               

               
               8-298, gnl|hg17|chr1 (165825154-165825643)
               

               
               8-298, gnl|Hg17|chr1 (165825355-165825650)
               

               
               8-298, gnl|mm7|chr1 (164409732-164409242)
               

               
               8-298, gnl|Mm7|chr1 (164409522-164409233)
               

               
               8-298, gnl|panTro1|chr1 (148090533-148091022)
               

               
               8-298, gnl|rheMac2|chr1 (198857264-198857782)
               

               
               8-298, gnl|rn3|chr13 (80235211-80234735)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tra (0.123092)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)

	8-298, gnl\|bosTau2\|chr16 (22909659-22909956)
	8-298, gnl\|canFam2\|chr7 (32437880-32437391)
	8-298, gnl\|dasNov1\|scaffold_2156 (109693-110131)
	8-298, gnl\|echTel1\|scaffold_282412 (60307-60775)
	8-298, gnl\|hg17\|chr1 (165825154-165825643)
	8-298, gnl\|Hg17\|chr1 (165825355-165825650)
	8-298, gnl\|mm7\|chr1 (164409732-164409242)
	8-298, gnl\|Mm7\|chr1 (164409522-164409233)
	8-298, gnl\|panTro1\|chr1 (148090533-148091022)
	8-298, gnl\|rheMac2\|chr1 (198857264-198857782)
	8-298, gnl\|rn3\|chr13 (80235211-80234735)