Non-Coding RNA Search

ruio02_f17.y1

Sequence:


               
               ccactggcctacatcacagtcacagcaatgcaggatccaagctgcgtctgtgacctacac
cacagctcatggcgacaccagatccttaacccactgagcaaggccagggatccaacctgc
atcctcttgaatactagtcagattcatttccactgagcgacgacgggaactccACTTCAT
TTTTTAATGTAAATGCATTTTTAAAGGAAAGCTTACATCTTCCATAAATTAAAAAGTTAC
AGAATATAAAGATAAATAAAAATAAAGGGAAATTCTTGGCTTCTGATCTGATTGGGTAAC
AAATGATTTCTTATCTGATTGCCCTGTAAGTCATCTGATAAAGTTCAGATTTttgagata
tactgtagataccataaagttcaacactttacaatgtaaactgcagtggttttttagtat
attcacaacattgtggaaccactaccactatctaatcccagacaattttcatcactccaa
aaagaaaccccatactcagtagcattcactccccactgcttccttctcccagctcctgAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ccactggcctacatcacagtcacagcaatgcaggatccaagctgcgtctgtgacctacac
cacagctcatggcgacaccagatccttaacccactgagcaaggccagggatccaacctgc
atcctcttgaatactagtcagattcatttccactgagcgacgacgggaactccACTTCAT
TTTTTAATGTAAATGCATTTTTAAAGGAAAGCTTACATCTTCCATAAATTAAAAAGTTAC
AGAATATAAAGATAAATAAAAATAAAGGGAAATTCTTGGCTTCTGATCTGATTGGGTAAC
AAATGATTTCTTATCTGATTGCCCTGTAAGTCATCTGATAAAGTTCAGATTTttgagata
tactgtagataccataaagttcaacactttacaatgtaaactgcagtggttttttagtat
attcacaacattgtggaaccactaccactatctaatcccagacaattttcatcactccaa
aaagaaaccccatactcagtagcattcactccccactgcttccttctcccagctcctgAC

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               204-538, gnl|bosTau2|chr10 (31048331-31048003)
               

               
               204-538, gnl|hg17|chr15 (61229337-61229907)
               

               
               204-538, gnl|Hg17|chr15 (61229906-61229592)
               

               
               204-538, gnl|panTro1|chr16 (61685908-61686482)
               

               
               204-538, gnl|rheMac2|chr7 (41523109-41523686)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               204-538, gnl|bosTau2|chr10 (31048331-31048003)
               

               
               204-538, gnl|hg17|chr15 (61229337-61229907)
               

               
               204-538, gnl|Hg17|chr15 (61229906-61229592)
               

               
               204-538, gnl|panTro1|chr16 (61685908-61686482)
               

               
               204-538, gnl|rheMac2|chr7 (41523109-41523686)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	204-538, gnl\|bosTau2\|chr10 (31048331-31048003)
	204-538, gnl\|hg17\|chr15 (61229337-61229907)
	204-538, gnl\|Hg17\|chr15 (61229906-61229592)
	204-538, gnl\|panTro1\|chr16 (61685908-61686482)
	204-538, gnl\|rheMac2\|chr7 (41523109-41523686)