ruio04_h16.y1
|
GAAGCTTTACGTCACCGACAAGAATATGATGAGATGGTGGCTGAGGCTAAAAAACGAGAA
ATTAAAGAAGCACATAAAAGAAAAAAAATAATGAAAGAACGATTTAAACAGGAAGAAAAC
ATTGCAAGTGCAATGGTAATTTGGATCAATGAAATACTACCCAATTGGGAAGTAATGCGT
AGTACCAGAAGAGTTCGAGAATTGTGGTGGCAGGGATTGCCCCCTAGTGTTCGTGGGAAA
GTATGGAGTCTAGCTGTAGGAAATGAACTAAATATCACTCCTGAACTTTATGAAATCTTC
CTCTCAAGAGCAAAAGAACGGTGGAAAAGCTTCAGTGAAACAAGTTCAGAGAATGACATA
GAAGGTGTATCTGTTGCTGATCGGGAAGCCAGTCTGGAATTAATTAAGTTGGACATATCC
CGTACATTTCCATCTCTCTACATCTTTCAGAAGGGTGGCCCATATCATGATGTCTTACAT
AGTATATTAGGGGCATATACATG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAAGCTTTACGTCACCGACAAGAATATGATGAGATGGTGGCTGAGGCTAAAAAACGAGAA
ATTAAAGAAGCACATAAAAGAAAAAAAATAATGAAAGAACGATTTAAACAGGAAGAAAAC
ATTGCAAGTGCAATGGTAATTTGGATCAATGAAATACTACCCAATTGGGAAGTAATGCGT
AGTACCAGAAGAGTTCGAGAATTGTGGTGGCAGGGATTGCCCCCTAGTGTTCGTGGGAAA
GTATGGAGTCTAGCTGTAGGAAATGAACTAAATATCACTCCTGAACTTTATGAAATCTTC
CTCTCAAGAGCAAAAGAACGGTGGAAAAGCTTCAGTGAAACAAGTTCAGAGAATGACATA
GAAGGTGTATCTGTTGCTGATCGGGAAGCCAGTCTGGAATTAATTAAGTTGGACATATCC
CGTACATTTCCATCTCTCTACATCTTTCAGAAGGGTGGCCCATATCATGATGTCTTACAT
AGTATATTAGGGGCATATACATG
|
|
gi|61820197|ref|XP_607189.1| |
Protein identifier
|
gi|61820197|ref|XP_607189.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
51-177, gnl|bosTau2|chr18 (24612708-24612833) |
|
51-177, gnl|canFam2|chr28 (11613826-11613979) |
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51-177, gnl|danRer3|chr17 (16528432-16528572) |
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51-177, gnl|dasNov1|scaffold_12453 (8837-8711) |
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51-177, gnl|echTel1|scaffold_293954 (49139-48986) |
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51-177, gnl|fr1|chrUn (298483781-298483913) |
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51-177, gnl|hg17|chr10 (96246779-96246932) |
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51-177, gnl|Hg17|chr10 (96246795-96246920) |
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51-177, gnl|loxAfr1|scaffold_56218 (295-448) |
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51-177, gnl|mm7|chr19 (38599530-38599683) |
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51-177, gnl|Mm7|chr19 (38599546-38599671) |
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51-177, gnl|monDom2|scaffold_14 (28074890-28074736) |
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51-177, gnl|panTro1|chr8 (98003850-98004003) |
|
51-177, gnl|rheMac2|chr9 (93963661-93963814) |
|
51-177, gnl|rn3|chr14 (79828838-79828966) |
|
51-177, gnl|xenTro1|scaffold_180 (1378259-1378112) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
51-177, gnl|bosTau2|chr18 (24612708-24612833) |
|
51-177, gnl|canFam2|chr28 (11613826-11613979) |
|
51-177, gnl|danRer3|chr17 (16528432-16528572) |
|
51-177, gnl|dasNov1|scaffold_12453 (8837-8711) |
|
51-177, gnl|echTel1|scaffold_293954 (49139-48986) |
|
51-177, gnl|fr1|chrUn (298483781-298483913) |
|
51-177, gnl|hg17|chr10 (96246779-96246932) |
|
51-177, gnl|Hg17|chr10 (96246795-96246920) |
|
51-177, gnl|loxAfr1|scaffold_56218 (295-448) |
|
51-177, gnl|mm7|chr19 (38599530-38599683) |
|
51-177, gnl|Mm7|chr19 (38599546-38599671) |
|
51-177, gnl|monDom2|scaffold_14 (28074890-28074736) |
|
51-177, gnl|panTro1|chr8 (98003850-98004003) |
|
51-177, gnl|rheMac2|chr9 (93963661-93963814) |
|
51-177, gnl|rn3|chr14 (79828838-79828966) |
|
51-177, gnl|xenTro1|scaffold_180 (1378259-1378112) |
