Non-Coding RNA Search

ruio06_j15.y1

Sequence:


               
               AAGAAAAGCAGAGCTGGGAAGTACAGGTGGCTGCATGAAAAATGCCCTGTAGAATCCCCC
TATATATTCACTAAGGACAATAAAAGCTTAGTGACTTTTAAAGTGTCAACTAATCAAGGG
TGATTTTCTTTGAGACAGAAGGAAATTTAAATTTATCTATTTGAATTGGTTCAGGGATCA
GGCTACTCCGAGGACTACTCCATCTGTGGCAGGAGGAGGATCAGCAATTCACATTTATGT
CCCCTTGAACAACCAGGGGAATGTTTTGAAATTCAGATTAGAATTTACTGCTGAATCATA
TCAACCACTGACATCCTCACATTGCAAGGACAAGGTCCTTCAGTAAGTCTGAATTTCCCA
ACATCCTGGAAACATGAGTTGCTCGGTGAAGTCATTCTGTACTGTGGGCATGTGACTACC
TGTCTGAGTATCTGGCTCGAACCCCCAATAATCATGCAACTTTCTGGCACTATATAGGGA
AACCACAGACCAAATCCAACATGAGGCAAAGCCTGAAAGCTGATTTTCCCTTAGAATCAT
GTGACTCCTTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAAAGCAGAGCTGGGAAGTACAGGTGGCTGCATGAAAAATGCCCTGTAGAATCCCCC
TATATATTCACTAAGGACAATAAAAGCTTAGTGACTTTTAAAGTGTCAACTAATCAAGGG
TGATTTTCTTTGAGACAGAAGGAAATTTAAATTTATCTATTTGAATTGGTTCAGGGATCA
GGCTACTCCGAGGACTACTCCATCTGTGGCAGGAGGAGGATCAGCAATTCACATTTATGT
CCCCTTGAACAACCAGGGGAATGTTTTGAAATTCAGATTAGAATTTACTGCTGAATCATA
TCAACCACTGACATCCTCACATTGCAAGGACAAGGTCCTTCAGTAAGTCTGAATTTCCCA
ACATCCTGGAAACATGAGTTGCTCGGTGAAGTCATTCTGTACTGTGGGCATGTGACTACC
TGTCTGAGTATCTGGCTCGAACCCCCAATAATCATGCAACTTTCTGGCACTATATAGGGA
AACCACAGACCAAATCCAACATGAGGCAAAGCCTGAAAGCTGATTTTCCCTTAGAATCAT
GTGACTCCTTTAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               83-553, gnl|bosTau2|chr1 (59498743-59498275)
               

               
               83-553, gnl|canFam2|chr8 (13397022-13397564)
               

               
               83-553, gnl|echTel1|scaffold_301065 (111257-111784)
               

               
               83-553, gnl|hg17|chr14 (30629674-30630234)
               

               
               83-553, gnl|Hg17|chr14 (30630230-30629754)
               

               
               83-553, gnl|loxAfr1|scaffold_9007 (98321-97766)
               

               
               83-553, gnl|mm7|chr12 (49748762-49749251)
               

               
               83-553, gnl|monDom2|scaffold_53 (3702915-3703529)
               

               
               83-553, gnl|oryCun1|scaffold_214590 (7555-7028)
               

               
               83-553, gnl|panTro1|chr15 (29775228-29775783)
               

               
               83-553, gnl|rheMac2|chr7 (94044083-94044632)
               

               
               83-553, gnl|rn3|chr6 (71836237-71836719)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               83-553, gnl|bosTau2|chr1 (59498743-59498275)
               

               
               83-553, gnl|canFam2|chr8 (13397022-13397564)
               

               
               83-553, gnl|echTel1|scaffold_301065 (111257-111784)
               

               
               83-553, gnl|hg17|chr14 (30629674-30630234)
               

               
               83-553, gnl|Hg17|chr14 (30630230-30629754)
               

               
               83-553, gnl|loxAfr1|scaffold_9007 (98321-97766)
               

               
               83-553, gnl|mm7|chr12 (49748762-49749251)
               

               
               83-553, gnl|monDom2|scaffold_53 (3702915-3703529)
               

               
               83-553, gnl|oryCun1|scaffold_214590 (7555-7028)
               

               
               83-553, gnl|panTro1|chr15 (29775228-29775783)
               

               
               83-553, gnl|rheMac2|chr7 (94044083-94044632)
               

               
               83-553, gnl|rn3|chr6 (71836237-71836719)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	83-553, gnl\|bosTau2\|chr1 (59498743-59498275)
	83-553, gnl\|canFam2\|chr8 (13397022-13397564)
	83-553, gnl\|echTel1\|scaffold_301065 (111257-111784)
	83-553, gnl\|hg17\|chr14 (30629674-30630234)
	83-553, gnl\|Hg17\|chr14 (30630230-30629754)
	83-553, gnl\|loxAfr1\|scaffold_9007 (98321-97766)
	83-553, gnl\|mm7\|chr12 (49748762-49749251)
	83-553, gnl\|monDom2\|scaffold_53 (3702915-3703529)
	83-553, gnl\|oryCun1\|scaffold_214590 (7555-7028)
	83-553, gnl\|panTro1\|chr15 (29775228-29775783)
	83-553, gnl\|rheMac2\|chr7 (94044083-94044632)
	83-553, gnl\|rn3\|chr6 (71836237-71836719)