ruio11_b10.y1
|
CTCGTGCCGGTTTGTTGGGCTGTCTCTTCTTTTAGCTGGCATTATTTCCTTAAATCACGT
TCGACAAGTTATACAGCATGATGGCCGGAACCAAGAGAAGCTAAAGAAATTTATGATTCG
AATCGGAGTCTTCAGTGGCCTGTATCTTGTGCCATTAGTGATGCTTCTTGGATGTTATGT
CTATGAGCAAGTGAACAGGATCACCTGGGAGATAACTTGGGTCTCTGACCATTGTCGTCA
GTACCATATACCATGTCCTTATCAGGTAAAAGCTGTCATTTGTATTATTTCACTACTGAA
TTTTAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCGTGCCGGTTTGTTGGGCTGTCTCTTCTTTTAGCTGGCATTATTTCCTTAAATCACGT
TCGACAAGTTATACAGCATGATGGCCGGAACCAAGAGAAGCTAAAGAAATTTATGATTCG
AATCGGAGTCTTCAGTGGCCTGTATCTTGTGCCATTAGTGATGCTTCTTGGATGTTATGT
CTATGAGCAAGTGAACAGGATCACCTGGGAGATAACTTGGGTCTCTGACCATTGTCGTCA
GTACCATATACCATGTCCTTATCAGGTAAAAGCTGTCATTTGTATTATTTCACTACTGAA
TTTTAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
10-306, gnl|bosTau2|chr14 (36206105-36206401) |
|
10-306, gnl|canFam2|chr13 (7787973-7788365) |
|
10-306, gnl|danRer3|chrNA (15364125-15364517) |
|
10-306, gnl|dasNov1|scaffold_49521 (3116-2716) |
|
10-306, gnl|echTel1|scaffold_43394 (186-575) |
|
10-306, gnl|fr1|chrUn (130118683-130118291) |
|
10-306, gnl|galGal2|chr2 (128100517-128100909) |
|
10-306, gnl|hg17|chr8 (104406484-104406876) |
|
10-306, gnl|Hg17|chr8 (104406647-104406943) |
|
10-306, gnl|loxAfr1|scaffold_208326 (674-1066) |
|
10-306, gnl|mm7|chr15 (39035886-39036278) |
|
10-306, gnl|Mm7|chr15 (39036049-39036341) |
|
10-306, gnl|monDom2|scaffold_3 (59269531-59269139) |
|
10-306, gnl|oryCun1|scaffold_199542 (40022-39630) |
|
10-306, gnl|panTro1|chr7 (106798418-106798810) |
|
10-306, gnl|rheMac2|chr8 (105843540-105843932) |
|
10-306, gnl|rn3|chr7 (74607943-74608335) |
|
10-306, gnl|tetNig1|chr8 (1241490-1241098) |
|
10-306, gnl|xenTro1|scaffold_3 (5340168-5339776) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
10-306, gnl|bosTau2|chr14 (36206105-36206401) |
|
10-306, gnl|canFam2|chr13 (7787973-7788365) |
|
10-306, gnl|danRer3|chrNA (15364125-15364517) |
|
10-306, gnl|dasNov1|scaffold_49521 (3116-2716) |
|
10-306, gnl|echTel1|scaffold_43394 (186-575) |
|
10-306, gnl|fr1|chrUn (130118683-130118291) |
|
10-306, gnl|galGal2|chr2 (128100517-128100909) |
|
10-306, gnl|hg17|chr8 (104406484-104406876) |
|
10-306, gnl|Hg17|chr8 (104406647-104406943) |
|
10-306, gnl|loxAfr1|scaffold_208326 (674-1066) |
|
10-306, gnl|mm7|chr15 (39035886-39036278) |
|
10-306, gnl|Mm7|chr15 (39036049-39036341) |
|
10-306, gnl|monDom2|scaffold_3 (59269531-59269139) |
|
10-306, gnl|oryCun1|scaffold_199542 (40022-39630) |
|
10-306, gnl|panTro1|chr7 (106798418-106798810) |
|
10-306, gnl|rheMac2|chr8 (105843540-105843932) |
|
10-306, gnl|rn3|chr7 (74607943-74608335) |
|
10-306, gnl|tetNig1|chr8 (1241490-1241098) |
|
10-306, gnl|xenTro1|scaffold_3 (5340168-5339776) |
