Non-Coding RNA Search

ruio13_g13.y1

Sequence:


               
               TCTCTTTGTTCTAAGTTCTTAATCCACCTGTGTCTCCTCGTGTCGTGGGCTCATTTTGTG
CATGTTCTGTGTCCCAAAACATTTGTTCTTCCTCTTTCAAGATGTTTTCCTCACCATTTC
ATAGCATGGCTTTTAAAGCTATTTAATTTAAGAAAGCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCTTTGTTCTAAGTTCTTAATCCACCTGTGTCTCCTCGTGTCGTGGGCTCATTTTGTG
CATGTTCTGTGTCCCAAAACATTTGTTCTTCCTCTTTCAAGATGTTTTCCTCACCATTTC
ATAGCATGGCTTTTAAAGCTATTTAATTTAAGAAAGCATA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-146, gnl|bosTau2|chr2 (54447688-54447542)
               

               
               1-146, gnl|canFam2|chr37 (20418307-20418612)
               

               
               1-146, gnl|echTel1|scaffold_217783 (1586-1882)
               

               
               1-146, gnl|hg17|chr2 (210221415-210221713)
               

               
               1-146, gnl|Hg17|chr2 (210221464-210221616)
               

               
               1-146, gnl|loxAfr1|scaffold_195124 (1030-734)
               

               
               1-146, gnl|mm7|chr1 (66523470-66523769)
               

               
               1-146, gnl|Mm7|chr1 (66523520-66523673)
               

               
               1-146, gnl|oryCun1|scaffold_139257 (481-187)
               

               
               1-146, gnl|panTro1|chr13 (100336052-100336348)
               

               
               1-146, gnl|rheMac2|chr12 (73313975-73314276)
               

               
               1-146, gnl|rn3|chr9 (65244010-65244380)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr2 (54447688-54447542)
               

               
               1-146, gnl|canFam2|chr37 (20418307-20418612)
               

               
               1-146, gnl|echTel1|scaffold_217783 (1586-1882)
               

               
               1-146, gnl|hg17|chr2 (210221415-210221713)
               

               
               1-146, gnl|Hg17|chr2 (210221464-210221616)
               

               
               1-146, gnl|loxAfr1|scaffold_195124 (1030-734)
               

               
               1-146, gnl|mm7|chr1 (66523470-66523769)
               

               
               1-146, gnl|Mm7|chr1 (66523520-66523673)
               

               
               1-146, gnl|oryCun1|scaffold_139257 (481-187)
               

               
               1-146, gnl|panTro1|chr13 (100336052-100336348)
               

               
               1-146, gnl|rheMac2|chr12 (73313975-73314276)
               

               
               1-146, gnl|rn3|chr9 (65244010-65244380)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	1-146, gnl\|bosTau2\|chr2 (54447688-54447542)
	1-146, gnl\|canFam2\|chr37 (20418307-20418612)
	1-146, gnl\|echTel1\|scaffold_217783 (1586-1882)
	1-146, gnl\|hg17\|chr2 (210221415-210221713)
	1-146, gnl\|Hg17\|chr2 (210221464-210221616)
	1-146, gnl\|loxAfr1\|scaffold_195124 (1030-734)
	1-146, gnl\|mm7\|chr1 (66523470-66523769)
	1-146, gnl\|Mm7\|chr1 (66523520-66523673)
	1-146, gnl\|oryCun1\|scaffold_139257 (481-187)
	1-146, gnl\|panTro1\|chr13 (100336052-100336348)
	1-146, gnl\|rheMac2\|chr12 (73313975-73314276)
	1-146, gnl\|rn3\|chr9 (65244010-65244380)